Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0565
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.4  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   8.4  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    23   8.4  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   8.4  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   8.4  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   8.4  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   8.4  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    23   8.4  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   8.4  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 192 NKGELITNVVNNLIRNNKMNCWSTPTSSGCKAPRTSSGIVSRLSS 326
           N+G   TN  NN   NN  N  +T  S    A  ++S +++  +S
Sbjct: 91  NEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNS 135


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = +3

Query: 69   ASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNK 197
            A L+        +I  +H+ +DV+++++ S +  S L  + N+
Sbjct: 1974 APLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALYSSGNE 2016


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = +3

Query: 69   ASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNK 197
            A L+        +I  +H+ +DV+++++ S +  S L  + N+
Sbjct: 1975 APLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALYSSGNE 2017


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 281 ASRAGRRTPAVHLVVSYQIV 222
           +SRA  RTP ++ V+ Y IV
Sbjct: 119 SSRAQARTPVLYQVMVYDIV 138


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 538 RTNRN-GDHMAYGVANFDGFRAQWYLVPAELNNEF 639
           R NR+ G+ + YGV     F  QW    +E  N F
Sbjct: 242 RKNRSPGNVLCYGVDLNRNFPFQWDRTTSECTNNF 276


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 NCWSTPTSSGCKAP 290
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 NCWSTPTSSGCKAP 290
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 NCWSTPTSSGCKAP 290
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 NCWSTPTSSGCKAP 290
           NC  T  ++GCKAP
Sbjct: 17  NCECTTDTTGCKAP 30


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 538 RTNRN-GDHMAYGVANFDGFRAQWYLVPAELNNEF 639
           R NR+ G+ + YGV     F  QW    +E  N F
Sbjct: 242 RKNRSPGNVLCYGVDLNRNFPFQWDRTTSECTNNF 276


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 249 NCWSTPTSSGCKAP 290
           NC  T  ++GCKAP
Sbjct: 593 NCECTTDTTGCKAP 606


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,475
Number of Sequences: 2352
Number of extensions: 12335
Number of successful extensions: 31
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)