Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0565
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42838-2|AAB52493.1|  417|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    27   8.8  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z32682-5|CAA83613.1|  189|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    27   8.8  
U58761-2|AAB00713.1|  308|Caenorhabditis elegans Hypothetical pr...    27   8.8  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    27   8.8  

>U42838-2|AAB52493.1|  417|Caenorhabditis elegans Hypothetical
           protein T08G2.3 protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +3

Query: 57  CLFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIR 236
           CL  ++ YA E  AF  ++A H     ++AD    +E ++LI T      + N V +   
Sbjct: 285 CLDESAKYALERKAFGTVIANHQAVQFMLADMAVNLELARLI-TYKSANDVDNKVRSSYN 343

Query: 237 NNKMNCWSTPTSS 275
            +   C++  T++
Sbjct: 344 ASIAKCFAADTAN 356


>Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical
           protein C09H10.3 protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 491 FKIENTSANRTWH*KSELTEMATTWLTGSL-TSMVLGPSGTWFP 619
           ++++   A   WH   E+    + W+ G L TS + G  G  FP
Sbjct: 62  YRLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGRGGAGFP 105


>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
            C18D4.2b protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 141  IADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCWSTPTSSGCKAPRTSS 302
            + D D   E S+  + ++   L+ NV NN+IR++++   S+ + S CK  +T S
Sbjct: 1302 VPDNDPDSEDSRR-HKEHFQNLLLNV-NNMIRHSRITQNSSDSKSNCKKEQTGS 1353


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 141  IADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCWSTPTSSGCKAPRTSS 302
            + D D   E S+  + ++   L+ NV NN+IR++++   S+ + S CK  +T S
Sbjct: 1302 VPDNDPDSEDSRR-HKEHFQNLLLNV-NNMIRHSRITQNSSDSKSNCKKEQTGS 1353


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
            protein C18D4.2b protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 141  IADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCWSTPTSSGCKAPRTSS 302
            + D D   E S+  + ++   L+ NV NN+IR++++   S+ + S CK  +T S
Sbjct: 1302 VPDNDPDSEDSRR-HKEHFQNLLLNV-NNMIRHSRITQNSSDSKSNCKKEQTGS 1353


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 141  IADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCWSTPTSSGCKAPRTSS 302
            + D D   E S+  + ++   L+ NV NN+IR++++   S+ + S CK  +T S
Sbjct: 1302 VPDNDPDSEDSRR-HKEHFQNLLLNV-NNMIRHSRITQNSSDSKSNCKKEQTGS 1353


>Z32682-5|CAA83613.1|  189|Caenorhabditis elegans Hypothetical
           protein M04D8.5 protein.
          Length = 189

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 570 VSHVVAISVSSDFQCQVLFALVFSI 496
           +SH  A+ ++ DFQC  +F L+F I
Sbjct: 18  ISHTRALILAFDFQCLAVFFLMFLI 42


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27   PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDNK 197
            P +K+ VV LC+ A +LY    T    E + E LY  + V  A    + +R +++  +  
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNE-- 979

Query: 198  GELITNVVNNLIRNNKMNCWSTPTSSGC--KAPRTSSGIVSRLSSHLS 335
             E+     +N++  N M     P    C  KA    +GI+S L  +LS
Sbjct: 980  -EIEPETYHNIL--NVM-----PEGQACLEKAYDCVNGIMSDLEEYLS 1019


>U58761-2|AAB00713.1|  308|Caenorhabditis elegans Hypothetical
           protein C01F1.5 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
 Frame = +2

Query: 359 MYRRDGLAFTLSDNGGVAYGDSKDRTSSRVSWKF------IPLWENNKVYFKIENTSANR 520
           +YR D +++  +  GG+    + D    +++W F      +PLW   K        + N 
Sbjct: 169 LYRPDAVSYVQAIGGGIPNLGTPDYNPIQLTWPFDPESITVPLWAREKFRLTPYCPARND 228

Query: 521 TWH*KSELTEMATTWLTGSLTSM 589
                 +   + T W T  L SM
Sbjct: 229 ADIGAGQRVGLLTKWDTVKLNSM 251


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
 Frame = +3

Query: 27   PKMKSAVVVLCLFAASLYADEGT-AFNEILAEHLY--NDVIIADYDSAVERSKLIYTDNK 197
            P +K+ VV LC+ A +LY    T    E + E LY  + V  A    + +R +++  +  
Sbjct: 922  PTVKNVVVDLCMTAQTLYISPSTRETREKILEQLYEWHSVCTAQMRISGKRFQMVMNE-- 979

Query: 198  GELITNVVNNLIRNNKMNCWSTPTSSGC--KAPRTSSGIVSRLSSHLS 335
             E+     +N++  N M     P    C  KA    +GI+S L  +LS
Sbjct: 980  -EIEPETYHNIL--NVM-----PEGQACLEKAYDCVNGIMSDLEEYLS 1019


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,678,093
Number of Sequences: 27780
Number of extensions: 264475
Number of successful extensions: 764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)