Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0565
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    24   1.5  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.4  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 541 FGLSMPSSVCASVLYLEVDLVVLPQRNEFPADS*TGP 431
           F  ++ +++CA+  Y+ +  V  P R  FP     GP
Sbjct: 6   FIFALLATICAAFAYVPLPNVPQPGRRPFPTFPGQGP 42


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 233 TKQQDELLEYAYQLWMQGSEDIVR 304
           TK+Q+ L+  A + W++  + IVR
Sbjct: 92  TKKQEMLVRSAIKYWVERHKHIVR 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,571
Number of Sequences: 438
Number of extensions: 3337
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)