Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0564
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 70 1e-12
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 34 0.12
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 33 0.15
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 32 0.47
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.62
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 31 1.1
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41) 30 1.4
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 30 1.9
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 30 1.9
SB_54391| Best HMM Match : MarR (HMM E-Value=0.95) 29 2.5
SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18) 29 2.5
SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5) 29 2.5
SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28) 29 2.5
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35) 29 2.5
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 29 3.3
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 3.3
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 29 4.4
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 29 4.4
SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 5.8
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 28 5.8
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27) 28 5.8
SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3) 28 7.7
SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69) 28 7.7
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 28 7.7
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/68 (48%), Positives = 42/68 (61%)
Frame = +2
Query: 296 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPP 475
+ FD+S+LKH E QEKNPLP KD + E V+ FD +++KH TEEKNPLP
Sbjct: 683 VASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPD 740
Query: 476 IEAIEAEK 499
+ I EK
Sbjct: 741 AKTIAQEK 748
Score = 68.5 bits (160), Expect = 4e-12
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +2
Query: 296 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPP 475
++ F+ S+L+H ET+EKN LP KD +A EK GVE F K ++KH T EKNPLP
Sbjct: 454 VKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPLPD 512
Query: 476 IEAIEAE 496
+ I AE
Sbjct: 513 AQNIRAE 519
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +2
Query: 257 VATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKT 430
+A EK + + F G+E F ++LKH ET EKNPLPD + AE + L D V FD +
Sbjct: 479 IADEK-RTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTS 537
Query: 431 QMKHTTTEEKNPLPPIEAIEAE 496
++KH T+EK +P + IEAE
Sbjct: 538 KLKHVETKEKVVMPTKDVIEAE 559
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 296 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 469
++ FD S+LKH ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 643 VKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPL 702
Query: 470 PPIEAIEAEKEKNNS 514
P + I E + +
Sbjct: 703 PTKDDITTESTETRA 717
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 296 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 469
++ FD S+LKH TQEKNPLP + E +N D V FD T++KH TT+EK+ +
Sbjct: 567 VKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIM 626
Query: 470 PPIEAIEAE 496
P E I+ E
Sbjct: 627 PSQEDIKEE 635
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 296 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 469
+ KFD++ LKH +T+EKN LP + + E D V+ F+K++++H T+EKN L
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTL 473
Query: 470 PPIEAIEAEK 499
P + I EK
Sbjct: 474 PTKDTIADEK 483
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +2
Query: 254 NVATEKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 388
++ TE T+ ++ FD S+LKH +T+EKNPLPD +A EKA
Sbjct: 707 DITTESTETRA--EVKTFDHSKLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 442 HDDGRKESTAPDRSYRSGEGKEQFLNGIENFDPTKLKHTXTCEKNPLPTXDVIEA 606
H + ++++T P + + E + +G+E F KLKH T EKNPLP I A
Sbjct: 464 HVETKEKNTLPTKDTIADEKRTAPFSGVEVFQKNKLKHVETLEKNPLPDAQNIRA 518
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 382 ESPPEPL-GRSRTLRQDSDEA-HDDGRKESTAPDRSYRSGEGKEQFLNGIENFDPTKLKH 555
E PE L RS + D+ + H + +++ P + E + +++FD +KLKH
Sbjct: 519 EMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRAE-VKSFDHSKLKH 577
Query: 556 TXTCEKNPLPTXDVIEAREISLN 624
T EKNPLPT + I N
Sbjct: 578 VVTQEKNPLPTPQTLHEELIPKN 600
Score = 36.3 bits (80), Expect = 0.022
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 523 IENFDPTKLKHTXTCEKNPLPTXDVIE 603
+++FD +KLKH T EKNPLP+ V++
Sbjct: 643 VKSFDHSKLKHVETVEKNPLPSAAVLK 669
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 514 LNGIENFDPTKLKHTXTCEKNPLPTXDVI 600
++ + +FD +KLKH EKNPLPT D I
Sbjct: 680 VSAVASFDASKLKHVEVQEKNPLPTKDDI 708
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 523 IENFDPTKLKHTXTCEKNPLPTXDVIEAREIS 618
++ FD +KLKH T EKNPLP I + S
Sbjct: 719 VKTFDHSKLKHVQTEEKNPLPDAKTIAQEKAS 750
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 442 HDDGRKESTAP-DRSYRSGEGKEQFLNGIE--NFDPTKLKHTXTCEKNPLPTXDVI 600
H ++++T P D + + ++F + E +F+ +KL+H T EKN LPT D I
Sbjct: 424 HVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDTI 479
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 356 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAE 496
P +V + + + V FD +KH T+EKN LP E I+ E
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQE 442
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +3
Query: 150 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAETL 260
+P+V D +S++ F+TS L+ V+T EK+V+P+ + +
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVI 556
Score = 31.1 bits (67), Expect = 0.83
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 499 GKEQFLNGIENFDPTKLKHTXTCEKNPLPTXDVIE 603
G + ++ + FD LKH T EKN LP+ + I+
Sbjct: 406 GSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIK 440
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 523 IENFDPTKLKHTXTCEKNPLPTXDVIEAREI 615
+ +FD TKLKH T EK+ +P+ + I+ +
Sbjct: 607 VASFDHTKLKHVTTQEKSIMPSQEDIKEEAV 637
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ FD ++ +H + E++P +K A +LLD
Sbjct: 184 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 243
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G+ +FD+ + +H K I+ IE + + S A R
Sbjct: 244 GLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALR 284
Score = 31.5 bits (68), Expect = 0.62
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 282 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 341
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G+ +FD+ + +H K I+ IE + + S A R
Sbjct: 342 GLRYFDQAKEEHAKLIPKYHEIMIKMIEQDPKSEKSYQALR 382
Score = 31.1 bits (67), Expect = 0.83
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 37 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 96
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G+ +FD+ + +H K I+ IE + + S A R
Sbjct: 97 GLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALR 137
Score = 31.1 bits (67), Expect = 0.83
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ F ++ +H + E++P +K A +LLD
Sbjct: 135 ALRDTTHDLVDGLRYFGQAEEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLD 194
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G+ +FD+ + +H K I+ IE + + S A R
Sbjct: 195 GLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALR 235
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ D ++ +H + T E++P +K A +LLD
Sbjct: 128 ALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPSSEKSYQALRDTTHDLLD 187
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G++HF + + +H K I+ IE + + S A R
Sbjct: 188 GLQHFGQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALR 228
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ D ++ +H + T E++P DK A +LLD
Sbjct: 226 ALRDTTHDLLDGLRYSDQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYKALRDTTHDLLD 285
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS 514
G+ FD+ + +H K I+ IE + + S
Sbjct: 286 GLRDFDQAKEEHAKLIPKYHKIMIKTIEQDPTSDKS 321
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 31.9 bits (69), Expect = 0.47
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 269 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTT 448
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 474 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEHAK 530
Query: 449 TEEKNPLPPIEAIEAEKEKNNS 514
K I+ IE + S
Sbjct: 531 LIPKYHEIMIKTIEQDPSSEKS 552
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 68 ESSIPFVIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 202
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -1
Query: 383 SPLRQRLCPEAGSSPESRCASAGS---NQTSRY--RRIKTSGSSQWQRFSRRKH 237
SP R+R P A SS S ++ S T RY ++ T+ +W+R RRKH
Sbjct: 177 SPKRRRCIPMATSSSPSSSSNTDSPFLEITPRYSQEQLSTNLHMEWKRLQRRKH 230
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +2
Query: 332 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNN 511
+T E++P +K A +LLDG+ +FD+ + +H K I+ I+ +
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKTIKQDPSSEK 596
Query: 512 S*TASR 529
S A R
Sbjct: 597 SYQALR 602
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ FD ++ +H +T +++P +K A +LLD
Sbjct: 551 ALRDTTHDLLDGLRYFDQAKEEHAKLIPKYHEIMIKTIKQDPSSEKSYQALRDTTHDLLD 610
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASR 529
G+ F + + +H K I+ IE + + S A R
Sbjct: 611 GLRDFGQAKEEHAKLIPKYHEIMIKTIEQDPTSDKSYQALR 651
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 416 HFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*TASRTSIPL 544
H ++ + +HT E+ P PP E+ N S RT++P+
Sbjct: 803 HREERKRRHTPHEDSPPPPPPPPPPPEEPSNKSRVIDRTTVPM 845
>SB_25209| Best HMM Match : Astacin (HMM E-Value=7.69999e-41)
Length = 533
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 314 SNQTSRYRRIKTSGSSQWQRFS 249
+N+TS+YRRI+ GS Q RFS
Sbjct: 62 TNRTSKYRRIRRRGSRQTWRFS 83
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 11/96 (11%)
Frame = +2
Query: 260 ATEKTQKSLFDGIEKFDSSQLKHT-----------ETQEKNPLPDKDVVAAEKAHQNLLD 406
A T L DG+ FD + +H + E++P +K A NL D
Sbjct: 581 ALRDTTHDLLDGLRYFDQASKEHAKLIPKYHEILIKKIEQDPSSEKRYQALRDTTYNLFD 640
Query: 407 GVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS 514
G+ FD + +H K I+ IE + + S
Sbjct: 641 GLRDFDHAKEEHAKLIPKYHEIMIKTIEQDPTSDKS 676
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +2
Query: 269 KTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 442
K ++ L I K+ +K T E++P +K A +LLDG+ +FD+ +H
Sbjct: 549 KGKEELAKLIPKYHEIMIK---TIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_20002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2484
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +1
Query: 313 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 492
E +E + +EP +G RR RSG + S T S E ++S+ + +
Sbjct: 902 ETSEEETEEADEPPTGHRRARSGSMGSLEIKSSST---SSMELRQPLARQSS---DGFAA 955
Query: 493 GEGKEQFLNGIENFDPTKLK-HTXTCEKNPLPT 588
EG+ + I PTK+ H + E N + T
Sbjct: 956 FEGRTGRFSDISESKPTKVSPHNTSAEVNVIVT 988
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 138 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIV 239
SLK L K+ TDL+S ++G ++ L ++V+ K+V
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLV 367
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 278 KSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEE 457
KS+F + + + TET+E NP D AE+ ++ +G T+ K T E
Sbjct: 276 KSVFKRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTNMET 335
Query: 458 -KNPLPPIEAIEAEKE 502
+ + +EAE++
Sbjct: 336 LRKEMLEFTRLEAERK 351
>SB_54391| Best HMM Match : MarR (HMM E-Value=0.95)
Length = 837
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 341 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*T 520
E++P +K A +LLDG+ +FD+ +H K I+ IE + S
Sbjct: 308 EQDPSSEKSYQALRDTTHDLLDGLRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSCK 367
Query: 521 ASR 529
A R
Sbjct: 368 ALR 370
>SB_49258| Best HMM Match : Herpes_UL6 (HMM E-Value=0.18)
Length = 899
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 341 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*T 520
E++P +K A +LLDG+ +FD+ +H K I+ IE + S
Sbjct: 186 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSYQ 245
Query: 521 ASR 529
A R
Sbjct: 246 ALR 248
>SB_48646| Best HMM Match : Sulfotransfer_1 (HMM E-Value=8.5)
Length = 674
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 287 FDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNP 466
+ GI + DSS + + + +PD ++AE ++ V+H +K + TT +
Sbjct: 371 YTGITESDSS-MSLARVRRTSSVPDSLQLSAELLSVGSVESVDHREKYPLNKTTADYLEM 429
Query: 467 LPPIEAI 487
+ P+ A+
Sbjct: 430 ISPLVAV 436
>SB_31755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 341 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKEKNNS*T 520
E++P +K A +LLDG+ +FD+ +H K I+ IE + S
Sbjct: 189 EQDPSSEKSYQALRDTTHDLLDGMRYFDQAWKEHAKLIPKYHEIMIKNIEQDPSSEKSCK 248
Query: 521 ASR 529
A R
Sbjct: 249 ALR 251
>SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 313 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKES 465
E E + E+PA+GQR+ R + + L R ++ + DS++ D+ + ES
Sbjct: 19 EEEEKDEEKEEKPATGQRK-RKTSTQKQALTRKKSKQSDSED-EDEKKSES 67
>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
Length = 859
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 334 DSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAP-DRSYRSGEGK-E 507
D+G +S R S ES E + + T +D D D R+ +++P D S R G+G +
Sbjct: 8 DNGVALSSMSSRQTSTESLEENIRKILTSCEDDDNEFLDRRRSTSSPEDVSNRKGKGSPK 67
Query: 508 QFLNGIENFDPTK 546
+ NG ++ D K
Sbjct: 68 EVENGKKSSDKGK 80
>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
Length = 430
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +2
Query: 278 KSLFDGIEKFDSSQLKHTET---QEKN-PLPDKDVVAAEKAHQNLLDGVEHFDKTQM-KH 442
++L +E DS + ET KN LP+ +V +K++ + + H K++ KH
Sbjct: 232 RTLIKELEPTDSRLEEDIETLLAMHKNGELPNASMVQTKKSNLKVKLNMRHQAKSKKRKH 291
Query: 443 TTTEEKNPLPPIEAIEAEKEK 505
T E+ +PL E ++ +K K
Sbjct: 292 TDKEDIDPLAYYEEVKMKKMK 312
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = +1
Query: 268 EDPEVFIRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHD 447
E PE F RR R+ RD G P+ R + +P G R R + D D
Sbjct: 602 ERPEEFPRRGRDEPEFVRPRGRDDGGRPSREPPRDQHRRPYDDPEGLERESRGERDVRRD 661
Query: 448 DGRKESTAPDRSYRSGEGKEQ 510
D R E P S G G+++
Sbjct: 662 DPR-EDRRPGMS--EGRGRDR 679
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +2
Query: 311 SSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIE 490
+ QL + T + P+ KD + V+HF + + E NPLPP + +
Sbjct: 390 TKQLCSSYTNQSPPIKAKDGSTLTTEREQAARWVQHFQEVLNQPEPEEPANPLPPQDILN 449
Query: 491 AE 496
+
Sbjct: 450 ID 451
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 266 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLL 403
EKT+ S+ + + DSS T+EK +KD E+ ++L+
Sbjct: 1552 EKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLERWEESLM 1597
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 EPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRK-ESTAPDRS 483
EP R+C SPP GRS+T+ + D R ST+ D+S
Sbjct: 335 EPPQASRQC----SPPSRTGRSKTIHKRPRMTQPDSRNVSSTSRDKS 377
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +2
Query: 329 TETQEKN--PLPDKDVVAAEK---AHQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEA 493
TET E+N P+ KD + K A ++ +E D + K T+ K+P + +
Sbjct: 1155 TETVERNKEPVKKKDSSKSSKDSKAKESASSSIEKKDTSFKKKVTSSAKSPSHSSKTVTK 1214
Query: 494 EKEKNNS*TASRTS 535
EK+ S S++S
Sbjct: 1215 EKQAATSSKTSKSS 1228
>SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 343
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 1 GPXALSPALSVFSRSPTESLSARIFYPLRHQKYIDSEWPAP*VTLPP 141
G A SP S +R P +S AR YP R + W AP PP
Sbjct: 217 GTRARSPVDSAKARPPVDSARAR--YPRRQRHIKKLPWTAPEQDPPP 261
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 290 DGIEKFDSSQLKHTETQEKNPLP 358
D +E+F S +H T +KNPLP
Sbjct: 206 DRLEQFSSQTGRHINTTKKNPLP 228
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +2
Query: 266 EKTQKSLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHT 445
E ++ + +E+ + K + +EK +K+ + EK Q E +K + KH
Sbjct: 303 ELKERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKEKQK-----ERREKEKQKHQ 357
Query: 446 TTEEKNPLPPIEAIEAEKEK 505
+EK E +E EK+K
Sbjct: 358 EKKEKERQREKEKLEKEKQK 377
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 454 RKESTAPDRSYRSGEGKEQFLNGIE---NFDPTKLKHTXTCEKNPLPTXDV 597
R++ T+P +S SG+GKE+ L+ + N D +K+ K+P + D+
Sbjct: 2295 RQQETSPKKSPNSGKGKEKILHELTQYLNSDRKVVKNKSRNVKSPQNSEDL 2345
>SB_45935| Best HMM Match : Aldolase_II (HMM E-Value=1.1e-27)
Length = 468
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 427 DSDEAHDDGRKESTAPDRSYRSGEGKEQFLNGIENFDPTK 546
D DE HD G K A R GEG + E PTK
Sbjct: 395 DEDEDHD-GEKSDEADHRDEADGEGSSPTADSPEPDSPTK 433
>SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 720
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = +2
Query: 299 EKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQ---NLLDGVEHFDKTQMKHTTTEEKNPL 469
+ +DS + + + +K +A E H + HFDK K+ TT K P+
Sbjct: 419 QSYDSPENGKAPSTTCSKALEKGFLAGEGTHDFSAGMFKYTLHFDKLYQKNNTTGNKRPV 478
Query: 470 PPIEAIEAEKE 502
I AE +
Sbjct: 479 RRIPEFVAEND 489
>SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 337 SGEEPASGQRRCRSGE---SPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 507
S + +S +RR R E PP + ++ DGR +S AP R+ +G KE
Sbjct: 8 SSKSSSSRRRRPREQEIFIGPPTGMTSDSSVASSRGRRDGDGRSKSKAPPRAPETGLPKE 67
>SB_18819| Best HMM Match : DUF822 (HMM E-Value=0.3)
Length = 866
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 290 DGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNL-LDGVEHFDKTQMKHTTTEEKNP 466
D I + + + + + K D +A + ++ N+ LD +E FD + HT N
Sbjct: 34 DRIRRLNRERQRRRRIKLKMSRHDDPTMAPDASNVNMNLDNLEGFDNADLDHTDQSGINV 93
Query: 467 LPPIEAIEAEKEKNNS 514
E +E +K+ +
Sbjct: 94 KSEQEFVEVHLQKSRN 109
>SB_2942| Best HMM Match : Peptidase_M10_N (HMM E-Value=0.69)
Length = 123
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -1
Query: 407 RPRGSGGLSPLRQRLCPEAGSSPESRCASAGSNQTSRYRR-IKTSGSSQWQRFSR 246
RP GG E S S+CA + S SR RR + + QW R R
Sbjct: 66 RPTLDGGRRTSHTTSSSETISPSRSKCACSNSRSASRPRRHLDFTSQEQWTRKRR 120
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 27.9 bits (59), Expect = 7.7
Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Frame = +1
Query: 316 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAP----DRS 483
P DS + A + C + P + L+++ D+ DD ES P D+
Sbjct: 2319 PGNTCTDSNVKTADPKDSCVADACSDVPERETNLLQEEEDKV-DDEAIESKEPVLDLDQE 2377
Query: 484 YRSGEGK----EQFLNGIENFDPTKLKHTXTCE 570
G+ E F NGIEN T K CE
Sbjct: 2378 ADGVNGRYSDDEYFPNGIENLKNTSKKLLDKCE 2410
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 391 PEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQFLNGIENFDPTKLKHT 558
PEP G+ T R + D +ES AP++ + + K++ +PT+ T
Sbjct: 362 PEPEGKKGTKR-GKKKTSKDATEESEAPNKKRKEKKKKKKKKKASSKIEPTETAET 416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,655,263
Number of Sequences: 59808
Number of extensions: 422150
Number of successful extensions: 1699
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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