Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0561
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 32 0.31
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 31 0.95
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 31 0.95
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 30 1.3
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.7
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 30 1.7
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 2.9
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 2.9
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 29 3.8
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 29 3.8
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 28 5.1
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 28 5.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 5.1
U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 5.1
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 5.1
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 28 6.7
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 28 6.7
AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 8.9
Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical pr... 27 8.9
U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22 homeopro... 27 8.9
U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22 homeopro... 27 8.9
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.31
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 64 PTEPQSPT-----PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
PT P +PT P + T TT S PTT +K ST T + M T + TT
Sbjct: 260 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMK----STPTTPTTPTTMKSTPTTPTTP 315
Query: 229 *TAWSTPTS 255
T STPT+
Sbjct: 316 TTMKSTPTT 324
Score = 31.9 bits (69), Expect = 0.41
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 PTEPQSPT-----PNSKTIFTTASSLPTT-TMPLKKANRSTRTRRAKSSQMS*TNSYETT 225
PT P +PT P + T TT S PTT T P +ST T + M T + TT
Sbjct: 221 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP--TTMKSTPTTPTTPTTMKSTPTTPTT 278
Query: 226 R*TAWSTPTS 255
T STPT+
Sbjct: 279 PTTMKSTPTT 288
Score = 31.9 bits (69), Expect = 0.41
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 64 PTEPQSPT-----PNSKTIFTTASSLPTT-TMPLKKANRSTRTRRAKSSQMS*TNSYETT 225
PT P +PT P + T TT S PTT T P +ST T + M T + TT
Sbjct: 309 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP--TTMKSTPTTPTTPTTMKSTPTTPTT 366
Query: 226 R*TAWSTPTS 255
T STPT+
Sbjct: 367 PTTMKSTPTT 376
Score = 31.1 bits (67), Expect = 0.72
Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 PTEPQS--PTPNSKTIFTTASSLPTT-TMPLKKANRSTRTRRAKSSQMS*TNSYETTR*T 234
PT P + TP + T TT S PTT T P +ST T + M T + TT T
Sbjct: 172 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTP--TTMKSTPTTPTTPTTMKSTPTTPTTPTT 229
Query: 235 AWSTPTS 255
STPT+
Sbjct: 230 MKSTPTT 236
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1
Query: 64 PTEPQSPT-----PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
PT P +PT P + T TT S PTT +K ST T + M T + TT
Sbjct: 374 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMK----STPTTPTTPTTMKSTPTTPTTM 429
Query: 229 *TAWSTPTSL 258
+ +TP+++
Sbjct: 430 KSTPTTPSTM 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Frame = +1
Query: 64 PTEPQSPT-----PNSKTIFTTASSLPTT-TMPLKKANRSTRTRRAKSSQMS*T-----N 210
PT P +PT P + T TT S PTT T P + T KS+ + T
Sbjct: 361 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMK 420
Query: 211 SYETTR*TAWSTPTS 255
S TT T STPT+
Sbjct: 421 STPTTPTTMKSTPTT 435
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
T P + TP + T T ++ TTT P +T T ++ + T + TT T +T
Sbjct: 118 TTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTT 177
Query: 247 PTS 255
T+
Sbjct: 178 TTT 180
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 SPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*T-NSYETTR*TAWSTPTS 255
+PT + T TT + TTT P +T T +++ + T + TT T +TPT+
Sbjct: 111 TPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTT 170
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
T P +PT + T TT ++ PTTT T T + + T + TT T +T
Sbjct: 76 TTPTTPTTTTTTP-TTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTT 134
Query: 247 PTS 255
T+
Sbjct: 135 TTT 137
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWS 243
PT + TP + T TT ++ PTTT +T T ++ + T + TT T +
Sbjct: 112 PTTETTTTPTTTTP-TTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTT 170
Query: 244 TPTS 255
T T+
Sbjct: 171 TTTT 174
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 PTEPQSP-TPNSKTIFTT-ASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TA 237
PT +P T S+T TT ++ TTT P T T ++ + T + +TT+ T
Sbjct: 241 PTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTT 300
Query: 238 WSTPTS 255
+T T+
Sbjct: 301 TTTKTT 306
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
T + TP + T TT + TTT P T T ++ + + TT T +
Sbjct: 136 TTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTA 195
Query: 247 PTS 255
PT+
Sbjct: 196 PTT 198
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPT---TTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TA 237
+E + TP + T TT + T TT P +T T AK+++ S T + +TT+ T
Sbjct: 252 SETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTK-STTTTTKTTKTT- 309
Query: 238 WSTPTS 255
STPT+
Sbjct: 310 -STPTT 314
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
T+P + T T TT ++ PTTT K +ST T +++ + T S TT T T
Sbjct: 267 TKPTTTTTTPTTTPTTTTT-PTTTTTTAKTTKSTTT----TTKTTKTTSTPTTTTTTPKT 321
Query: 247 P 249
P
Sbjct: 322 P 322
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
PT Q+ TP + TI TT +PTTT PL+K N + A S M N T +
Sbjct: 94 PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
T ++ TP + T +T++S P+TT + ++ T + + T S TTR T +T
Sbjct: 526 TSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVRT-STPTTRRTTTTT 584
Query: 247 P 249
P
Sbjct: 585 P 585
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 30.7 bits (66), Expect = 0.95
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 61 MPTEPQSPTPNSKTIFTTASSLP----TTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
+PTEP + +S T +T LP T + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 229 *TAWSTPTSLDARLQGYRPGVL 294
+T S + +L G P L
Sbjct: 295 EPTTTTKGS-EEQLGGKGPSPL 315
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 30.7 bits (66), Expect = 0.95
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 61 MPTEPQSPTPNSKTIFTTASSLP----TTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
+PTEP + +S T +T LP T + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 229 *TAWSTPTSLDARLQGYRPGVL 294
+T S + +L G P L
Sbjct: 295 EPTTTTKGS-EEQLGGKGPSPL 315
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 30.7 bits (66), Expect = 0.95
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 61 MPTEPQSPTPNSKTIFTTASSLP----TTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
+PTEP + +S T +T LP T + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 229 *TAWSTPTSLDARLQGYRPGVL 294
+T S + +L G P L
Sbjct: 295 EPTTTTKGS-EEQLGGKGPSPL 315
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 30.7 bits (66), Expect = 0.95
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 61 MPTEPQSPTPNSKTIFTTASSLP----TTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR 228
+PTEP + +S T +T LP T + +A+ ST T A+ S + T + TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTTE 294
Query: 229 *TAWSTPTSLDARLQGYRPGVL 294
+T S + +L G P L
Sbjct: 295 EPTTTTKGS-EEQLGGKGPSPL 315
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKAN 159
PT + TP+S + T SSLPTT+ L N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 28 KLFCVFSWRLYMPTEPQSPTPN-SKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS* 204
++ C + R T +PT + TI T+ +++ TT+ KA +T+T + ++
Sbjct: 195 QIICKYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFT 254
Query: 205 TNSYETTR*TAWSTPTSLDARL 270
T + +TT+ ++PTS A +
Sbjct: 255 TTTIQTTK-KITTSPTSTTASI 275
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 269 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSW 448
+ ++RECFP +I + +Y ++G+ + DS DG L + K+S +
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602
Query: 449 KFVPL 463
FV L
Sbjct: 603 SFVNL 607
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLP--TTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAW 240
T P + T T TT ++ P TTT P ST T ++ + T + TT TA
Sbjct: 267 TTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTAS 326
Query: 241 ST 246
+T
Sbjct: 327 TT 328
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
TE + S T TT ++ PTTT T T + + T + TT+ T +T
Sbjct: 299 TESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKPTT-TT 357
Query: 247 PTS 255
PT+
Sbjct: 358 PTT 360
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWS 243
PT +S + + + TT+++ P+T+ ++ ST + A SS S +S +++ T S
Sbjct: 475 PTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQS 534
Query: 244 TPTS 255
+ T+
Sbjct: 535 STTT 538
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWS 243
PT +S + + + TT+++ P+T+ ++ ST + A SS S +S +++ T S
Sbjct: 475 PTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQS 534
Query: 244 TPTS 255
+ T+
Sbjct: 535 STTT 538
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 76 QSPTPNSKTIFTT---ASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST 246
Q+PT +++ TT SS PTTT P +T ++ S++ + + S TT A
Sbjct: 200 QNPTTSNQKNETTDEATSSPPTTTTPTTTLKPTTSPQKPDSTEEATSPSQSTTTPVATQN 259
Query: 247 PTS 255
PT+
Sbjct: 260 PTT 262
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 40 VFSWRLYMPTEPQSPTPNSKTIFTTASSLPTTTMPLK 150
V + R +PT P+ P +T T AS L TT +P+K
Sbjct: 647 VSTQRAPVPTTPRPTAPAVQTTTTRASRLETTRVPVK 683
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 48 VASLYANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 188
+ L N + + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 85 TPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY-----ETTR*TAWSTP 249
TP+ T TT + PTTT ++ +T K + ++ T + TT T STP
Sbjct: 509 TPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTP 568
Query: 250 TS 255
TS
Sbjct: 569 TS 570
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 85 TPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY-----ETTR*TAWSTP 249
TP+ T TT + PTTT ++ +T K + ++ T + TT T STP
Sbjct: 350 TPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTP 409
Query: 250 TS 255
TS
Sbjct: 410 TS 411
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +1
Query: 85 TPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY-----ETTR*TAWSTP 249
TP+ T TT + PTTT ++ +T K + ++ T + TT T STP
Sbjct: 390 TPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTP 449
Query: 250 TS 255
TS
Sbjct: 450 TS 451
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 73 PQSPTPNSKTIFTTAS-SLPTTTMPLKKANRSTRTR 177
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 481 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 353
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 481 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 353
+L++LP LP++ TR+ GK +V+A S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 67 TEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TN-SYETTR*TAWS 243
T +PT S T TT ++ TTT ST + ++ + T+ + TT T +
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTA 119
Query: 244 TPTSLDARLQGYRPGVL 294
TPT+ + P +
Sbjct: 120 TPTTTTTTMPPCNPNAV 136
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Frame = +1
Query: 67 TEPQSPTPN--SKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR---- 228
T S TP +K T + +PT + P + ST T + S+ S + TTR
Sbjct: 70 TSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTT 129
Query: 229 *TAWSTPTS 255
TA STPTS
Sbjct: 130 TTATSTPTS 138
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 57 LYANGTSVSDSKLEDDLYNSILVADYDNAVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 227
+YA S D LE DL+N + +Y++ + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 228 MN 233
++
Sbjct: 378 VS 379
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 73 PQ-SPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWST- 246
PQ S +P + TTAS PTTT P+ N T + + + T TT+ TA T
Sbjct: 541 PQTSASPTTTPTHTTASQ-PTTTKPVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTK 599
Query: 247 PTSLDARLQGYRPGVLP 297
PT + Q P P
Sbjct: 600 PTVPSSTTQTAPPVTTP 616
>U29488-2|AAA68774.2| 422|Caenorhabditis elegans Hypothetical
protein C56C10.6 protein.
Length = 422
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 43 FSWRLYMPTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQ 195
F W + + T P TP SK++ + + L T +KKA+R + K+S+
Sbjct: 305 FDWEMPISTTPSKSTP-SKSVTKSPAQLSKET--VKKASREKTLSKEKTSK 352
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 135 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCMEYAYQSGCKAPRI 278
+NA E SKQ+Y D K+ +++N ++ + + M ++ Y C ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ-TYLPKCTVHKL 97
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +3
Query: 135 DNAVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCMEYAYQSGCKAPRI 278
+NA E SKQ+Y D K+ +++N ++ + + M ++ Y C ++
Sbjct: 51 ENAQEFSKQLYHDLKNSILSNADDERLYKDIMTYLQ-TYLPKCTVHKL 97
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 19 KPFKLFCVFSW---RLYMPTEPQSPTPNSKTIFTTASSLPTT--TMPLKKANRSTRTRRA 183
KP+ + C F+ +P P P++ T TT + TT T +T T
Sbjct: 59 KPYNIDCPFAIPPITFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 118
Query: 184 KSSQMS*TNSYETTR*TAWSTP 249
++ + T + TT T STP
Sbjct: 119 TTTTPTTTTTTPTTTTTTRSTP 140
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 400 SAIVVAVIAQRQSKTVALVHQLNVVFGENKCELNREALPDDILGALHPDW 251
+A+ A IA + S +++Q +VV C++ +E +I+ L P W
Sbjct: 111 AAVAAATIASQSS----IINQTSVVTSTPSCQIKQEVERPEIIQRLMPPW 156
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTR 177
PT S T + TT S+LP+T+ + + STR R
Sbjct: 1156 PTTTTSTTTTTTPKLTTTSTLPSTSTAIATTDVSTRPR 1193
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 400 SAIVVAVIAQRQSKTVALVHQLNVVFGENKCELNREALPDDILGALHPDW 251
+A+ A IA + S +++Q +VV C++ +E +I+ L P W
Sbjct: 111 AAVAAATIASQSS----IINQTSVVTSTPSCQIKQEVERPEIIQRLMPPW 156
>AF016687-5|AAC48093.1| 709|Caenorhabditis elegans Hypothetical
protein T21D12.11 protein.
Length = 709
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 37 CVFSWRLYMPTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRT 174
C R + T+P SPT S TT + TT++ + ST T
Sbjct: 328 CSRKQRCHTTTQPPSPTTESLPTSTTTYEMNTTSLETSTTDISTIT 373
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 64 PTEPQSPTPNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWS 243
PT + T S T TT++S T+ + +T + S+ + T + +TT + S
Sbjct: 265 PTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTT-TTTMQTTTPSTTS 323
Query: 244 TPTS 255
TPT+
Sbjct: 324 TPTT 327
>Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical
protein F29F11.5c protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY 216
PN+ + +TA+S PT MP+ R A+SS +S T+ Y
Sbjct: 199 PNAFSSQSTAASFPTRAMPIPML---VRDSSARSSDISSTSPY 238
>Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical
protein F29F11.5b protein.
Length = 215
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY 216
PN+ + +TA+S PT MP+ R A+SS +S T+ Y
Sbjct: 131 PNAFSSQSTAASFPTRAMPIPML---VRDSSARSSDISSTSPY 170
>Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical
protein F29F11.5a protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY 216
PN+ + +TA+S PT MP+ R A+SS +S T+ Y
Sbjct: 262 PNAFSSQSTAASFPTRAMPIPML---VRDSSARSSDISSTSPY 301
>U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY 216
PN+ + +TA+S PT MP+ R A+SS +S T+ Y
Sbjct: 262 PNAFSSQSTAASFPTRAMPIPML---VRDSSARSSDISSTSPY 301
>U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 88 PNSKTIFTTASSLPTTTMPLKKANRSTRTRRAKSSQMS*TNSY 216
PN+ + +TA+S PT MP+ R A+SS +S T+ Y
Sbjct: 262 PNAFSSQSTAASFPTRAMPIPML---VRDSSARSSDISSTSPY 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,383
Number of Sequences: 27780
Number of extensions: 239117
Number of successful extensions: 1140
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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