Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0560
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. 31 0.91
AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated... 31 0.91
Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical... 29 2.1
Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical... 28 6.4
AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 28 6.4
AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical... 27 8.4
>U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein.
Length = 415
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 20 LGPRRQPXAISGGYGTMVFTKEPMVNLDMKMKELCIMKLL 139
+GP RQ + YG +T++ VN++ +K L ++LL
Sbjct: 28 MGPARQGMMLGNKYGNFTYTRDYGVNMEDDIKPLSAIELL 67
>AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated
protein 24 protein.
Length = 415
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 20 LGPRRQPXAISGGYGTMVFTKEPMVNLDMKMKELCIMKLL 139
+GP RQ + YG +T++ VN++ +K L ++LL
Sbjct: 28 MGPARQGMMLGNKYGNFTYTRDYGVNMEDDIKPLSAIELL 67
>Z80217-2|CAB02288.1| 209|Caenorhabditis elegans Hypothetical
protein F37B1.2 protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = -2
Query: 498 DLVRSGQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 319
D GQ+ L V E S ++ + + F ++P E V +VV+ +DF G F
Sbjct: 46 DKTPMGQMPVLNVDGFEIPQSAAITRYLA-RKFGFAGKTPEEEAWVDAVVDQFKDFFGEF 104
Query: 318 HLELVGVDEGLSTREHAHLI-HPMNCLTTSTFMYLSQL 208
++ G S E L +N +S F L+ L
Sbjct: 105 RKLIIAQRAGKSVEEIEKLTKEVINPAVSSFFKILNGL 142
>AL132949-27|CAB61105.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.31 protein.
Length = 209
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = -2
Query: 483 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 304
GQV L V + S ++ + + + F + ++P E + ++V+ +DF G F ++
Sbjct: 51 GQVPYLTVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQVWADAIVDQFKDFMGSFRERIM 109
Query: 303 GVDEGLSTREHAHL 262
G S E A +
Sbjct: 110 AHFAGKSQEEIAKI 123
>Z78415-1|CAB01671.1| 280|Caenorhabditis elegans Hypothetical
protein C17G1.1 protein.
Length = 280
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 571 SLAALVIFIIKALLMTWLSTKSRDRSRKERAGRDPCSRFC 452
S+A ++IF++ ALL +RSRK + R+P +C
Sbjct: 188 SIAVIMIFVVLALLKI---VYKEERSRKNKDDREPVVSYC 224
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2
Query: 387 RSPHENIEVLSVVEDSEDFD 328
R+P+ENI++L +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600
>Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical
protein F52B5.5a protein.
Length = 644
Score = 27.9 bits (59), Expect = 6.4
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 182 IAKEYNIEKSCDKYMNVDVVKQ 247
+ + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233
>AL132949-29|CAB61107.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.33 protein.
Length = 209
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = -2
Query: 483 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFFHLELV 304
GQV L+V + S ++ + + + F + ++P E ++V+ +DF G F ++
Sbjct: 51 GQVPVLSVDGFDIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGAFRQLIM 109
Query: 303 GVDEGLSTREHAHL 262
G E A +
Sbjct: 110 AQRSGKPAEEIAKI 123
>AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription
factor CEP-1 protein.
Length = 644
Score = 27.9 bits (59), Expect = 6.4
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 182 IAKEYNIEKSCDKYMNVDVVKQ 247
+ + N+ + C+K+M +DV+KQ
Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233
>AL132949-25|CAB61103.1| 209|Caenorhabditis elegans Hypothetical
protein Y53F4B.29 protein.
Length = 209
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -2
Query: 483 GQVETLAVGSVEARGSKSVDEHASVDPFSHPARSPHENIEVLSVVEDSEDFDGFF 319
GQV L+V E S ++ + + + F + ++P E ++V+ +DF G F
Sbjct: 51 GQVPVLSVDGFEIPQSAAIIRYLA-NKFGYAGKTPEEQAWADAIVDQFKDFMGSF 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,511,022
Number of Sequences: 27780
Number of extensions: 266619
Number of successful extensions: 766
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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