Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0559
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058468-1|AAL13697.1|  439|Drosophila melanogaster GH27361p pro...    43   3e-04
AE014296-2939|AAF49320.2|  439|Drosophila melanogaster CG7497-PA...    43   3e-04
AY121676-1|AAM52003.1|  496|Drosophila melanogaster RE27241p pro...    30   2.4  
AE014297-1401|AAF54714.3|  496|Drosophila melanogaster CG6965-PA...    30   2.4  

>AY058468-1|AAL13697.1|  439|Drosophila melanogaster GH27361p
           protein.
          Length = 439

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +3

Query: 522 CVTRVVLRVFGIGSVXIAVTXALERYLALTRXFLYXKQVXY 644
           CV  VV R FG+ S  IA   A ER++AL R F+Y K + Y
Sbjct: 132 CVGLVVWRFFGLSSGCIAAVMAAERWMALARPFIYHKHITY 172



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 397 RNRKHLLLLTSLAANDVVALVGMMXTMVV 483
           +N K+ L+L  LA N++VAL+GM+ T ++
Sbjct: 87  KNSKYTLMLRCLATNNLVALLGMLTTTLL 115


>AE014296-2939|AAF49320.2|  439|Drosophila melanogaster CG7497-PA
           protein.
          Length = 439

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +3

Query: 522 CVTRVVLRVFGIGSVXIAVTXALERYLALTRXFLYXKQVXY 644
           CV  VV R FG+ S  IA   A ER++AL R F+Y K + Y
Sbjct: 132 CVGLVVWRFFGLSSGCIAAVMAAERWMALARPFIYHKHITY 172



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 397 RNRKHLLLLTSLAANDVVALVGMMXTMVV 483
           +N K+ L+L  LA N++VAL+GM+ T ++
Sbjct: 87  KNSKYTLMLRCLATNNLVALLGMLTTTLL 115


>AY121676-1|AAM52003.1|  496|Drosophila melanogaster RE27241p
           protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 452 ATTSLAASEVS-SSKCFLLRTLLSPLLKAMIAIVFPIIPIAYTIFTTI 312
           A   LA  E+  S   FLLR +L+P+   +  ++  +I I Y I  T+
Sbjct: 196 ANICLARKEIKWSDSNFLLRKILNPIFHGISLVILLVIAIIYFILPTL 243


>AE014297-1401|AAF54714.3|  496|Drosophila melanogaster CG6965-PA
           protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 452 ATTSLAASEVS-SSKCFLLRTLLSPLLKAMIAIVFPIIPIAYTIFTTI 312
           A   LA  E+  S   FLLR +L+P+   +  ++  +I I Y I  T+
Sbjct: 196 ANICLARKEIKWSDSNFLLRKILNPIFHGISLVILLVIAIIYFILPTL 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,067,822
Number of Sequences: 53049
Number of extensions: 343707
Number of successful extensions: 849
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)