Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0558
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 380 FFQTFELNMYNIYIYHNYTIKQRNSAQKMFNFNSHV 273
           FF+  EL++  +Y+ HN   K  N+ + +F    H+
Sbjct: 242 FFRPVELSLMQLYLGHN---KLLNATKDLFGNMPHL 274


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 295 IFCAELRCFMV*LWYIY 345
           +F A + CF++ L+YIY
Sbjct: 1   MFLAYIACFLLLLYYIY 17


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 332 NYTIKQRNSAQKMFNFNSHV 273
           N+T KQ    +K F+FN ++
Sbjct: 259 NFTNKQLTELEKEFHFNKYL 278


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 332 NYTIKQRNSAQKMFNFNSHV 273
           N+T KQ    +K F+FN ++
Sbjct: 48  NFTNKQLTELEKEFHFNKYL 67


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 332 NYTIKQRNSAQKMFNFNSHV 273
           N+T KQ    +K F+FN ++
Sbjct: 48  NFTNKQLTELEKEFHFNKYL 67


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 363 FKCLKKNCCPLNFILFNIKFYL 428
           F C  K    +NF +FN+   L
Sbjct: 105 FNCCSKKSFRMNFAIFNLYMVL 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,115
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)