Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0558
         (599 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated...    29   9.4  
BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.      29   9.4  
BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated...    29   9.4  
AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associate...    29   9.4  
AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated...    29   9.4  

>BC057233-1|AAH57233.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ILHKKCLTLILTFYSIYLYFINKIRS 233
           ++H+ C+T    F  + LY+INKI S
Sbjct: 114 LIHRVCVTTCFIFSMVGLYYINKISS 139


>BC048205-1|AAH48205.1|  146|Homo sapiens KRTCAP2 protein protein.
          Length = 146

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ILHKKCLTLILTFYSIYLYFINKIRS 233
           ++H+ C+T    F  + LY+INKI S
Sbjct: 98  LIHRVCVTTCFIFSMVGLYYINKISS 123


>BC029806-1|AAH29806.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ILHKKCLTLILTFYSIYLYFINKIRS 233
           ++H+ C+T    F  + LY+INKI S
Sbjct: 114 LIHRVCVTTCFIFSMVGLYYINKISS 139


>AY157577-1|AAO13161.2|  114|Homo sapiens keratinocytes associated
           protein 2 protein.
          Length = 114

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ILHKKCLTLILTFYSIYLYFINKIRS 233
           ++H+ C+T    F  + LY+INKI S
Sbjct: 66  LIHRVCVTTCFIFSMVGLYYINKISS 91


>AL607067-2|CAH71196.1|  162|Homo sapiens keratinocyte associated
           protein 2 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 310 ILHKKCLTLILTFYSIYLYFINKIRS 233
           ++H+ C+T    F  + LY+INKI S
Sbjct: 114 LIHRVCVTTCFIFSMVGLYYINKISS 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,358,155
Number of Sequences: 237096
Number of extensions: 1206635
Number of successful extensions: 1076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)