Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0558
         (599 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   4.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.3  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   7.0  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 350 NIYIYHNYTIKQRNSAQKMFNFNSHVLFNISVFY 249
           N+ +Y    +K+ +   K  NFN HV   I+  +
Sbjct: 58  NVQLYIECAMKKFSFVDKDGNFNEHVSREIAKIF 91


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 316 NVILHKKCLTLILTFYSIYLYFINKI 239
           NV+L KK   ++L FY   ++ + ++
Sbjct: 12  NVVLVKKVKIVLLIFYGSIMFSMTQV 37


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 359 NMYNIYIYHNYTIKQRNSAQKMFNFNSHVLFNISV 255
           N YN   Y+NY     N  +K++ +N + +  I V
Sbjct: 87  NNYNYSNYNNYNNNYNNYNKKLY-YNINYIEQIPV 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,553
Number of Sequences: 438
Number of extensions: 3089
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)