Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0557
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   170   1e-44
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   170   1e-44
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.5  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  170 bits (413), Expect = 1e-44
 Identities = 74/90 (82%), Positives = 83/90 (92%)
 Frame = +3

Query: 255 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG 434
           +Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEG
Sbjct: 57  AYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEG 116

Query: 435 YPFNPCLTEXQXKEMEDKVSGTLSSFEGEL 524
           YPFNPCLTE Q KEME+KVS TLS  EGEL
Sbjct: 117 YPFNPCLTEAQYKEMEEKVSSTLSGLEGEL 146



 Score = 95.9 bits (228), Expect = 3e-22
 Identities = 44/56 (78%), Positives = 49/56 (87%)
 Frame = +1

Query: 88  LQGSDSKSXLKXYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAD 255
           L  SDSKS LK YL+++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDA+
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAE 56



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 542 PSXGMXKEXQQQLIDDXFLFNEGE 613
           P  GM KE QQ+LIDD FLF EG+
Sbjct: 152 PLTGMSKETQQKLIDDHFLFKEGD 175


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  170 bits (413), Expect = 1e-44
 Identities = 74/90 (82%), Positives = 83/90 (92%)
 Frame = +3

Query: 255 SYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEG 434
           +Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEG
Sbjct: 73  AYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEG 132

Query: 435 YPFNPCLTEXQXKEMEDKVSGTLSSFEGEL 524
           YPFNPCLTE Q KEME+KVS TLS  EGEL
Sbjct: 133 YPFNPCLTEAQYKEMEEKVSSTLSGLEGEL 162



 Score =  119 bits (287), Expect = 2e-29
 Identities = 56/72 (77%), Positives = 62/72 (86%)
 Frame = +1

Query: 40  MVDAATLEKLEAGFSKLQGSDSKSXLKXYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 219
           MVD A L+KLE GFSKL  SDSKS LK YL+++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 220 DSGVGIYAPDAD 255
           DSGVGIYAPDA+
Sbjct: 61  DSGVGIYAPDAE 72



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +2

Query: 542 PSXGMXKEXQQQLIDDXFLFNEGE 613
           P  GM KE QQ+LIDD FLF EG+
Sbjct: 168 PLTGMSKETQQKLIDDHFLFKEGD 191


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 135 GSIRQPEEQKDLIRIHPP 188
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 17 QVPEKPQQWSTPQPSR 64
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 290 HRGLPQWLQEDRQAPAQEL 346
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.132    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,161
Number of Sequences: 438
Number of extensions: 2676
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)