BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0556 (459 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 5.5 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 5.5 U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 7.3 AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 7.3 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 21.0 bits (42), Expect = 5.5 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +1 Query: 202 KLAEQAERYDDMAAAMKE*RKPASNLATRRG 294 KL Y+D E RK SNLA G Sbjct: 1350 KLKGINNEYEDQTEVPVEMRKTVSNLAQTSG 1380 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 21.0 bits (42), Expect = 5.5 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +1 Query: 202 KLAEQAERYDDMAAAMKE*RKPASNLATRRG 294 KL Y+D E RK SNLA G Sbjct: 1350 KLKGINNEYEDQTEVPVEMRKTVSNLAQTSG 1380 >U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. Length = 470 Score = 20.6 bits (41), Expect = 7.3 Identities = 8/27 (29%), Positives = 13/27 (48%) Frame = +2 Query: 116 SPSDKGISELVLFHRPRCPSTRKNWCN 196 +PS++ + EL R C +W N Sbjct: 295 NPSERVMRELGRIFRAYCRENHASWVN 321 >AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax protein. Length = 314 Score = 20.6 bits (41), Expect = 7.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -2 Query: 269 AGFRHSFIAAAMSSYRS 219 AG H AAA ++YRS Sbjct: 22 AGHHHEQSAAAAAAYRS 38 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 99,351 Number of Sequences: 336 Number of extensions: 1868 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 10511300 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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