Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0556
(459 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 2e-13
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 65 2e-11
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 65 3e-11
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_20595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_33715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 72.1 bits (169), Expect = 2e-13
Identities = 36/48 (75%), Positives = 38/48 (79%)
Frame = +3
Query: 258 TETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGSER*QQ 401
TE L EERNLLSV YKNVVGA+RSSWRVIS IEQK EGSER +Q
Sbjct: 9 TEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQ 56
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTE 380
V + G ELS E+RNLLSV YKNV+GARR+SWR+I+ IEQK E
Sbjct: 30 VAKMGTELSTEDRNLLSVAYKNVIGARRASWRIITSIEQKEE 71
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1
Query: 175 DKEELVQRAKLAEQAERYDDMAAAMKE*RKPASNLAT 285
DKEE V AKLAEQAERYDDM +MKE K + L+T
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELST 39
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 64.9 bits (151), Expect = 3e-11
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQK 374
VT+ G L++EERNLLSV YKNVVGARRSSWRVIS +EQK
Sbjct: 37 VTKEGKPLNDEERNLLSVAYKNVVGARRSSWRVISSMEQK 76
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 154 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAM 249
P+ +EEL+ AK+AEQAERYDDM AM
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAM 34
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 62.9 bits (146), Expect = 1e-10
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGS 386
V+E +LS EERNLLSV YKN+VG RRSSWRVIS IE+KT S
Sbjct: 110 VSEKYPKLSKEERNLLSVSYKNIVGQRRSSWRVISSIEEKTAES 153
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
M V +E L+ AKL+EQ +RYD+MA MKE
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKE 109
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 261 ETGVELSNEERNLLSVXYKNVVGARRSSWR 350
E L+ E RNLLSV YKNVVG++R +WR
Sbjct: 218 EINPSLNKEHRNLLSVGYKNVVGSKRFAWR 247
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
M + ELVQ AKLAEQ ER++D+ MK+
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKK 215
>SB_20595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 8 SGFVSPLAPQPFKTSISFSAREKLILCLNLLVQIHFSPSDKGISELVLFHRPR 166
S F+ PL ++ RE+L L L+ H S GI L LFH+ R
Sbjct: 173 STFMDPLGDTQRHRLLAVPTRERLCRMLGYLLNEHEFLSPFGIRSLSLFHKER 225
>SB_33715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 20 SPLAPQPFKTSISFSAREKLILCLN-LLVQIHFSPSDK 130
SPL P+P K ++ +AR IL N + V + P DK
Sbjct: 6 SPLPPRPNKAIVTINARTSEILMANDMAVDLFSYPRDK 43
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 142 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMA 240
+SPLPS+ +E+V KLAE+ E ++++
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVS 675
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 120 LPTRASVN*SSSIVHDVRRQGRTGA 194
+P RAS +SS +HD R+GRT A
Sbjct: 665 IPERASRRHASSALHDSLRRGRTTA 689
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,559,417
Number of Sequences: 59808
Number of extensions: 260772
Number of successful extensions: 604
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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