Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0556
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   3.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   5.1  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   6.8  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    22   9.0  

>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 158 RPRCPSTRKNWCNVP 202
           RPR PS R N  N+P
Sbjct: 126 RPRTPSMRVNCTNIP 140


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 LPSSTMS-VDKEELVQRAKLAEQAERYDDMAAA 246
           LP  T +  D E+++      +QAE Y DM+ A
Sbjct: 649 LPLRTQNKTDAEKILSHVHALKQAEGYIDMSCA 681


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 20  SPLAPQP-FKTSISFSAREKLIL 85
           +P+A Q  F+T +S +AR KLI+
Sbjct: 514 APVAKQTTFRTLLSIAARRKLIV 536


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 445 FSELLFYFNPIFYAICCYL 389
           F  ++FYF    +AI C++
Sbjct: 553 FQNVIFYFGTASFAIPCFV 571


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,570
Number of Sequences: 2352
Number of extensions: 8279
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)