Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0556
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 91 4e-19
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 89 1e-18
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 89 1e-18
Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 2.1
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 2.1
U50307-5|AAK71366.1| 297|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical p... 27 6.6
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 27 6.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.7
AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical... 27 8.7
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 91.1 bits (216), Expect = 4e-19
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGSER*QQMA 407
VTE G ELSNEERNLLSV YKNVVGARRSSWRVIS IEQKTEGSE+ QQMA
Sbjct: 31 VTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMA 81
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
MS KEELV RAKLAEQAERYDDMAA+MK+
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKK 30
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 410 EYRVKVEKELREICYE 457
EYR KVEKELR+IC +
Sbjct: 83 EYREKVEKELRDICQD 98
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 91.1 bits (216), Expect = 4e-19
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGSER*QQMA 407
VTE G ELSNEERNLLSV YKNVVGARRSSWRVIS IEQKTEGSE+ QQMA
Sbjct: 31 VTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMA 81
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
MS KEELV RAKLAEQAERYDDMAA+MK+
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKK 30
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 410 EYRVKVEKELREICYE 457
EYR KVEKELR+IC +
Sbjct: 83 EYREKVEKELRDICQD 98
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 89.0 bits (211), Expect = 1e-18
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGSER*QQMA 407
VTE G ELSNEERNLLSV YKNVVGARRSSWRVIS IEQKTEGSE+ QQ+A
Sbjct: 31 VTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLA 81
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
MS EELVQRAKLAEQAERYDDMAAAMK+
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKK 30
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 410 EYRVKVEKELREICYE 457
EYRVKVE+EL +IC +
Sbjct: 83 EYRVKVEQELNDICQD 98
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 89.0 bits (211), Expect = 1e-18
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = +3
Query: 255 VTETGVELSNEERNLLSVXYKNVVGARRSSWRVISXIEQKTEGSER*QQMA 407
VTE G ELSNEERNLLSV YKNVVGARRSSWRVIS IEQKTEGSE+ QQ+A
Sbjct: 31 VTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLA 81
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1
Query: 166 MSVDKEELVQRAKLAEQAERYDDMAAAMKE 255
MS EELVQRAKLAEQAERYDDMAAAMK+
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKK 30
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 410 EYRVKVEKELREICYE 457
EYRVKVE+EL +IC +
Sbjct: 83 EYRVKVEQELNDICQD 98
>Z68216-1|CAA92459.1| 493|Caenorhabditis elegans Hypothetical
protein F27C8.1 protein.
Length = 493
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 23 PLAPQPFKTSISFSAREKLILCLNL-LVQIHFSPSDKGISELVLFHRPRCPSTRKNWCNV 199
P A +P K + + A L C+ L L+ + +P D GI L++ W N
Sbjct: 407 PDASRPIKVPLIWPAIF-LAGCIALVLIPMVAAPRDTGIGLLIMLSAVPVYGIFIGWKNK 465
Query: 200 PNWPNKLSDMTT 235
P W N+ D +T
Sbjct: 466 PKWFNEFIDSST 477
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2
Query: 290 LLVAKFDAGFRHSFI---AAAMSSYRSACSANLARCTSSSLSTDIVDDGR 150
L+ +F G RH F +A SY S + +L+ TSS+ +TD ++ R
Sbjct: 906 LITREFLLGMRHDFTGTQSAMTGSYDSTSATSLSTWTSSTCATDEGEEKR 955
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
C28A5.6 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2
Query: 290 LLVAKFDAGFRHSFI---AAAMSSYRSACSANLARCTSSSLSTDIVDDGR 150
L+ +F G RH F +A SY S + +L+ TSS+ +TD ++ R
Sbjct: 906 LITREFLLGMRHDFTGTQSAMTGSYDSTSATSLSTWTSSTCATDEGEEKR 955
>U50307-5|AAK71366.1| 297|Caenorhabditis elegans Hypothetical
protein F43H9.4 protein.
Length = 297
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 270 RRFPSL-LHRGRHVV--ISLSLFGQFGTLHQFFLVDGHRGR 157
RRFPSL + +G +V IS G LH F DGHRG+
Sbjct: 191 RRFPSLCVRKGDELVGFISSETHGALAHLHVF---DGHRGK 228
>Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 249 EGVTETGVELSNEERNLLS 305
EG TET V+++NE R+++S
Sbjct: 396 EGYTETAVKIANENRDVIS 414
>Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 249 EGVTETGVELSNEERNLLS 305
EG TET V+++NE R+++S
Sbjct: 396 EGYTETAVKIANENRDVIS 414
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 101 VQIHFSPSDKGISELVLFHRPRCPSTRKN 187
+Q+H + SD+ ++ ++ P P TR+N
Sbjct: 274 LQVHLNESDRDVTRVLWVKNPDLPPTREN 302
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 209 ANLARCTSSSLSTDIVDDGRGL 144
AN A C S+S + D+VDD GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 209 ANLARCTSSSLSTDIVDDGRGL 144
AN A C S+S + D+VDD GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 209 ANLARCTSSSLSTDIVDDGRGL 144
AN A C S+S + D+VDD GL
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGL 3993
>AF078157-12|AAG24073.1| 338|Caenorhabditis elegans Hypothetical
protein F25E5.2 protein.
Length = 338
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 406 AICCYLSEPSVFCSIXEMTRHD 341
AICCYL PS+F + + D
Sbjct: 125 AICCYLHNPSLFTAANKTISQD 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,027,147
Number of Sequences: 27780
Number of extensions: 194786
Number of successful extensions: 480
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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