Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0554
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.25 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   4.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   9.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    20   9.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.25
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 356 KVFRVLYYAKDFDVFMRTACWMRERINGGMFVY 454
           K+ R+   A+  D  +  A + R+R+N  +F Y
Sbjct: 93  KLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYY 125


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 126 DMKMKELCIMKLLDHI 173
           D K+  LC+  L+DH+
Sbjct: 442 DEKLNALCMTWLMDHV 457


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -3

Query: 265 NDIEFMYLSQLFSMLYSLAISLMSSNMVGWR 173
           ND+ F+ ++Q+   + +      S N   WR
Sbjct: 451 NDVYFVTMTQVIQWIQNPRTITESKNFEPWR 481


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 230 EKLRQVHEFD 259
           E++RQVHE D
Sbjct: 27  EQMRQVHEVD 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,880
Number of Sequences: 336
Number of extensions: 1680
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)