Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0554
         (456 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376           29   2.3  
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133...    28   4.1  
04_01_0249 - 3284107-3286377                                           27   5.4  
09_02_0097 - 4232707-4232991,4233672-4233913,4234253-4234427           27   7.2  
12_01_0862 + 8161117-8163913,8164000-8164019                           27   9.5  
08_02_1413 + 26897815-26899299                                         27   9.5  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    27   9.5  

>10_02_0134 + 5667236-5669295,5669833-5669902,5670266-5670376
          Length = 746

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 26  GSSTTGLLGRGVSYSD*WWLXDDGLHQGTNG 118
           GS T G +G G   SD WW  D+G   G+NG
Sbjct: 369 GSRTGGTMGSGTG-SDWWWKQDNG--GGSNG 396


>02_01_0198 +
           1334563-1334994,1335872-1335919,1336096-1336351,
           1336733-1336881,1336969-1337097,1337425-1337592,
           1338416-1338610
          Length = 458

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 34  YYWPAWPRRQLQRLVVATGR 93
           + WP WP   + RLVVAT +
Sbjct: 88  FRWPGWPGASVFRLVVATDK 107


>04_01_0249 - 3284107-3286377
          Length = 756

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/49 (22%), Positives = 27/49 (55%)
 Frame = +3

Query: 135 MKELCIMKLLDHILQPTMFEDIKEIAKEYNIEKSCDKYMNSMSLSSSWR 281
           + +L + ++LD+  +PT +    +   +YN+   C +Y  S + + +W+
Sbjct: 365 VSDLNLFRILDNNKKPTRYRMWSQTIGQYNLLHECTRY-ESEARTKNWK 412


>09_02_0097 - 4232707-4232991,4233672-4233913,4234253-4234427
          Length = 233

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 156 KLLDHILQPTMF---EDIKEIAKEYNIEKSCDKYMNSMSLSSS 275
           KLLDHIL+ T F   E I EI   +    S  +Y  S+S  S+
Sbjct: 86  KLLDHILENTSFAHCETIIEIEDTHEESTSESEYATSISHDSN 128


>12_01_0862 + 8161117-8163913,8164000-8164019
          Length = 938

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 138 KELCIMKLLDHILQPTMFEDIKEIAKEYNIEKSCDK 245
           K LC + +++ +++P     ++EIA EY IEK  D+
Sbjct: 451 KRLCKLLVVEGLVEPRKNMTLEEIAMEY-IEKLVDR 485


>08_02_1413 + 26897815-26899299
          Length = 494

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 152 DAKLLHLHVKVYHWFLGEDHR 90
           D ++LHL    YHWFL  + R
Sbjct: 259 DGEILHLLHLYYHWFLPPEER 279


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 101 HQGTNGKP*HEDEGALHHEAA*PYPPADHV*GHQGDRQ 214
           H  ++G   H   G  H      +PPA  V GH  DRQ
Sbjct: 546 HGHSHGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQ 583


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,363,570
Number of Sequences: 37544
Number of extensions: 205521
Number of successful extensions: 551
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)