Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0552
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   3.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   3.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   8.7  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 120 LPAREGGDHRQRPGQQDH 173
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 119 TPTQEYVVPRSIPT 78
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 310 CTVASSNLRPMRRLASNIVCWGSSPP 233
           CT  + N R  R     I C  ++PP
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPP 39


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/35 (20%), Positives = 17/35 (48%)
 Frame = +1

Query: 205 RLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLC 309
           +L+G     +V  +  ++Y  PN+   +  ++  C
Sbjct: 138 QLLGHFGATKVYNSMKREYYWPNMYRTIKKRLRSC 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,827
Number of Sequences: 336
Number of extensions: 1804
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)