Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0552
(356 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 112 1e-26
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 112 1e-26
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 100 8e-23
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 98 3e-22
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 74 8e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 5e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 4e-05
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.12
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.28
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 0.86
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 2.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 2.6
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 4.6
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 25 4.6
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 24 6.1
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 24 8.0
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 24 8.0
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 24 8.0
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 8.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 112 bits (270), Expect = 1e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 252
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 59.3 bits (137), Expect = 2e-10
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P TIFDAKRLIGR+F D VQ+DMKHWPF V+
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVI 93
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 112 bits (270), Expect = 1e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 252
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 61.3 bits (142), Expect = 4e-11
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P TIFDAKRLIGRKF+D VQ+DMKHWPF V+
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVI 93
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 100 bits (239), Expect = 8e-23
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 249
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
Score = 56.0 bits (129), Expect = 2e-09
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ T+FDAKRLIGR++ED Q D+KHWPF V+
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVI 97
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 98.3 bits (234), Expect = 3e-22
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 249
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
Score = 50.0 bits (114), Expect = 1e-07
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXDR 353
P+ TIFD KRLIGRKF++ T+ D+K +PF +V D+
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDK 129
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 73.7 bits (173), Expect = 8e-15
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 243
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 244 NPNKQY 261
NP +
Sbjct: 109 NPENTF 114
Score = 39.9 bits (89), Expect = 1e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ T F KRLIGR+F++ VQ D+K P+ +V
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 5e-08
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +1
Query: 64 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 243
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 244 N 246
N
Sbjct: 63 N 63
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 4e-05
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 246
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.12
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNK 255
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 256 QYSMPNV 276
+S+ NV
Sbjct: 83 AHSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.28
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 71 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 166
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 27.1 bits (57), Expect = 0.86
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 175 PSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLCKPT*STGLSXLSXI 351
P +A T ER++ AAK A+N Y++ ++ D K++ C S +S +
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIECNVRASRSFPFVSKV 1310
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 2.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 157 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPXCI 53
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 220 AAKNQVAMNPNKQYSMPNVSSDVSSKML 303
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 4.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 82 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 168
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 24.6 bits (51), Expect = 4.6
Identities = 9/20 (45%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 305 SSIFELTSDETFGIEY-CLL 249
S+++ELT DET +++ C+L
Sbjct: 51 STVYELTGDETLNLKFTCIL 70
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 24.2 bits (50), Expect = 6.1
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 92 WVPRTLALVSSSTGRWRSSPTTRATGP-LRLMLRSQTPSVSS 214
W R + SSS R RSS ++R + P LRS S+SS
Sbjct: 90 WANRHSNVSSSSGSRGRSSVSSRDSSPSYSGALRSAERSISS 131
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 23.8 bits (49), Expect = 8.0
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 178 SYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKML 303
SY AF + NQ+A+ N+Q MP + + K +
Sbjct: 68 SYNAFLHWMSTVPKRYSNQLAVESNRQLKMPQNAREKPDKQV 109
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 23.8 bits (49), Expect = 8.0
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIAND 156
A+G LG Y+C+ +F + +A +
Sbjct: 428 AIGFKLGYIYACINLFSSFMIFFLAKE 454
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 23.8 bits (49), Expect = 8.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 68 KHPQ*ESIWVPRTLAL 115
KHPQ + +WVP A+
Sbjct: 131 KHPQIDGVWVPYDRAI 146
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 23.8 bits (49), Expect = 8.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 154 DQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
D+G T S+ +F D + + GDA + + A
Sbjct: 49 DEGLNTARSFSSFQDLKGMSGDAKEQESA 77
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,465,453
Number of Sequences: 5004
Number of extensions: 28943
Number of successful extensions: 113
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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