Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0552
(356 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 1e-31
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 3e-31
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 127 3e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 99 5e-22
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 1e-11
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 1e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.28
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 30 0.48
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 0.84
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 29 1.1
SB_23454| Best HMM Match : DUF1168 (HMM E-Value=4.2) 27 3.4
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07) 27 5.9
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 5.9
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_28078| Best HMM Match : SGS (HMM E-Value=1.5) 26 7.8
SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86) 26 7.8
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015) 26 7.8
SB_10001| Best HMM Match : Astacin (HMM E-Value=0) 26 7.8
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 26 7.8
SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 132 bits (318), Expect = 1e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 241 MNP 249
MNP
Sbjct: 61 MNP 63
Score = 56.8 bits (131), Expect = 5e-09
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXD 350
P+ T+FDAKRLIGRKF+D V DM HWPF V+ +
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIRE 97
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 3e-31
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 241 MNP 249
MNP
Sbjct: 61 MNP 63
Score = 54.0 bits (124), Expect = 3e-08
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXD 350
P TIFDAKRLIGR+F+D V+ DMKHW F VV +
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNE 97
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 127 bits (306), Expect = 3e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 241 MNP 249
+NP
Sbjct: 61 LNP 63
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXD 350
P+ TIFDAKRLIGR+++DATVQ+DMK WPF ++ D
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISD 97
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 99 bits (238), Expect = 5e-22
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 249
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 49.2 bits (112), Expect = 1e-06
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ T+FDAKRLIGR ++D +VQ D+K +PF VV
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVV 793
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 65.3 bits (152), Expect = 1e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 241 MNP 249
+NP
Sbjct: 90 INP 92
Score = 29.9 bits (64), Expect = 0.64
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXDR 353
P+ TI+DAKR IG+ F + K + F V D+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDK 127
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 7e-07
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 234
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 249 QQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
+ TI KR IGRKF D VQ ++ H P+ VV
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVV 151
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 130 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNK---QYSMPNVSSDVSSKM 300
G IIAND G+R TP+ VAF+DTE+LI + N+ Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 301 L 303
L
Sbjct: 143 L 143
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.28
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 139 EIIANDQGNRTTPSYVAFT-DTERL 210
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 30.3 bits (65), Expect = 0.48
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 1 GAHVC*VVLRTSNKTD*KYXMAKAPAVGIDL 93
G HVC +V T K K ++K PA GI+L
Sbjct: 1198 GDHVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 0.84
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 247 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 149
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -1
Query: 257 CLLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 78
CLL I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
>SB_23454| Best HMM Match : DUF1168 (HMM E-Value=4.2)
Length = 171
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 204 ASHRRCRQEPGGDEPQQTIFDAKRLIGRKFEDATVQADMKHWPFXVVXDR 353
AS R +PG EP+QT A+ +GR A D P V R
Sbjct: 119 ASADEGRSDPGTAEPEQTASTAEGTLGRGTRRAATSTDYGGRPSPVARRR 168
>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.1 bits (57), Expect = 4.5
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 308 HSSIFELTSDETFGIEYCLLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 129
+S + L + T +EY LG +ATW R + V AT L W L +++T
Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79
Query: 128 CWKTPTQEY 102
W T EY
Sbjct: 80 -WSTGDLEY 87
>SB_58559| Best HMM Match : AA_permease (HMM E-Value=1.5e-07)
Length = 530
Score = 26.6 bits (56), Expect = 5.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 269 GIEYCLLGFIATWFLAASPMRRSV 198
G+E CL+GF T F+ S +R ++
Sbjct: 35 GLESCLIGFAGTGFIHLSILRSTI 58
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 163 CPGRWR*SPPSRAGRHQRKSTWY 95
C GRW S AG ++KS WY
Sbjct: 3726 CVGRWWKEIKSLAGVSEKKSRWY 3748
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 169 TTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLCK 312
TTP+ + TE GDA + +Q + P ++++ SK LLC+
Sbjct: 92 TTPAAEPLSCTEG-DGDATETLNPPQTTRQQNPPTITNETISKKLLCE 138
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 87 RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGGDEPQQTIFD 266
R GY L R C R + +R + H++L R +RC G +P+ T F+
Sbjct: 239 RPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCAGTASGMDPKNTPFN 296
Query: 267 A 269
A
Sbjct: 297 A 297
>SB_28078| Best HMM Match : SGS (HMM E-Value=1.5)
Length = 934
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 130 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSS 282
G I + D G+ T+ +Y ++ ER G+ A+NP ++ N +S
Sbjct: 882 GDSGISSADSGSVTSMTYSMESEIERECGEKLTGNSALNPIREIEAENPAS 932
>SB_26881| Best HMM Match : Atrophin-1 (HMM E-Value=0.86)
Length = 1110
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 130 GKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSS 282
G I + D G+ T+ +Y ++ ER G+ A+NP ++ N +S
Sbjct: 748 GDSGISSADSGSVTSMTYSMESEIERECGEKLTGNSALNPIREIEAENPAS 798
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 123 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGG 239
P R DH R ++ RH A +R +EPGG
Sbjct: 942 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGG 980
>SB_2538| Best HMM Match : YTV (HMM E-Value=0.0015)
Length = 779
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +1
Query: 73 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 252
P G+DL G+FQ GK+++ + + +++A + +GDAAK ++ +
Sbjct: 547 PTGGLDLS------GMFQ-GKIQVASTAESEAGRKAFLAECERNPNLGDAAKMKLESCLS 599
Query: 253 KQYSMPNVSSDV 288
S N+ D+
Sbjct: 600 DLVSTANIFKDL 611
>SB_10001| Best HMM Match : Astacin (HMM E-Value=0)
Length = 397
Score = 26.2 bits (55), Expect = 7.8
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 91 LGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIG--DAAKNQVAMNPNKQYS 264
LGTTY + +G + +N Q P+ A +D R++G + + + NK Y
Sbjct: 309 LGTTYDIYSLMHYGTMGFSSNGQ-----PTLRALSDPNRILGQMNGFSSNDVVEINKLYD 363
Query: 265 MPNVSSDVSSK 297
++ S K
Sbjct: 364 GTSMQSTAQDK 374
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 123 PAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPGG 239
P R DH R ++ RH A +R +EPGG
Sbjct: 75 PDRHPHDHPDRLTHDRPGLIMGQDRHMADYREPHREPGG 113
>SB_3666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 127 HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMP 270
H V + + D G + P V + +RL+ + + N NK Y MP
Sbjct: 475 HRAVGLASADLGGASDPFAVIEVNNQRLVTNTIYKTLNPNWNKIYEMP 522
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,830,639
Number of Sequences: 59808
Number of extensions: 256339
Number of successful extensions: 742
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 560496285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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