Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0552
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 126 5e-30
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 126 5e-30
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 110 3e-25
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 110 3e-25
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 109 4e-25
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 99 1e-21
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 96 6e-21
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 96 6e-21
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 63 6e-11
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 63 6e-11
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 62 8e-11
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 62 8e-11
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 48 1e-06
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.004
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 28 2.2
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 27 3.9
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 27 3.9
AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical ... 27 3.9
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 5.1
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 5.1
Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical p... 26 6.7
Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 26 6.7
Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 26 6.7
Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 26 6.7
Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 26 6.7
Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 26 6.7
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 26 6.7
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 26 6.7
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 26 6.7
AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 26 6.7
AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 26 6.7
AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical ... 26 6.7
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 26 6.7
Z70783-4|CAA94854.1| 178|Caenorhabditis elegans Hypothetical pr... 26 8.9
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 126 bits (304), Expect = 5e-30
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 241 MNPN 252
MNP+
Sbjct: 61 MNPH 64
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P T+FDAKRLIGRKF+D VQ+DMKHWPF V+
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVI 95
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 126 bits (304), Expect = 5e-30
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 241 MNPN 252
MNP+
Sbjct: 61 MNPH 64
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P T+FDAKRLIGRKF+D VQ+DMKHWPF V+
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVI 95
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 110 bits (264), Expect = 3e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNP 249
NP
Sbjct: 61 RNP 63
Score = 58.4 bits (135), Expect = 1e-09
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXV 341
P+ T+FDAKRLIGR+F+++TVQ+D KHWPF V
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 110 bits (264), Expect = 3e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNP 249
NP
Sbjct: 61 RNP 63
Score = 58.4 bits (135), Expect = 1e-09
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXV 341
P+ T+FDAKRLIGR+F+++TVQ+D KHWPF V
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 109 bits (263), Expect = 4e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +1
Query: 61 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 240
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 241 MNP 249
NP
Sbjct: 61 RNP 63
Score = 58.4 bits (135), Expect = 1e-09
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXV 341
P+ T+FDAKRLIGR+F++ TVQ+D+KHWPF V
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTV 94
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 98.7 bits (235), Expect = 1e-21
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 249
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
Score = 55.2 bits (127), Expect = 1e-08
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ TIFDAKRLIGR + + TVQ D+KHWPF +V
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIV 123
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 96.3 bits (229), Expect = 6e-21
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 249
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 59.7 bits (138), Expect = 6e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ TIFDAKRLIGR + D TVQAD+KHWPF V+
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVI 126
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 96.3 bits (229), Expect = 6e-21
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 249
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 59.7 bits (138), Expect = 6e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
P+ TIFDAKRLIGR + D TVQAD+KHWPF V+
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVI 126
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 62.9 bits (146), Expect = 6e-11
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 243
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 244 N 246
N
Sbjct: 90 N 90
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 255 TIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
T+F KRLIGR++ED VQ D+K P+ +V
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 62.9 bits (146), Expect = 6e-11
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 243
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 244 N 246
N
Sbjct: 90 N 90
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 255 TIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
T+F KRLIGR++ED VQ D+K P+ +V
Sbjct: 94 TLFATKRLIGRRYEDPEVQKDLKVVPYKIV 123
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 252
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 253 KQYSMPNV 276
+ + +
Sbjct: 62 SLFDVKRI 69
Score = 42.7 bits (96), Expect = 7e-05
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 255 TIFDAKRLIGRKFEDATVQADMKHWPFXVVXD 350
++FD KR+IGR+++D +Q DM WPF V D
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 62.5 bits (145), Expect = 8e-11
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 252
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ + N
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 253 KQYSMPNV 276
+ + +
Sbjct: 62 SLFDVKRI 69
Score = 42.7 bits (96), Expect = 7e-05
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 255 TIFDAKRLIGRKFEDATVQADMKHWPFXVVXD 350
++FD KR+IGR+++D +Q DM WPF V D
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 48.4 bits (110), Expect = 1e-06
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +1
Query: 52 KYXMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 216
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 217 DAAKNQVAMNPNK 255
A Q NP +
Sbjct: 85 TRATEQQEHNPKR 97
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +3
Query: 246 PQQTIFDAKRLIGRKFE--DATVQADMKHWPFXVVXD 350
P++TI+DAKR IGR FE + +D K +PF + D
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLD 131
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 79 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 246
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 249 QQTIFDAKRLIGRKFEDATVQADMKHWPFXVV 344
+ T+ + K LIGRKF D Q + P VV
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVV 92
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.1 bits (82), Expect = 0.004
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 76 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 252
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA P+
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85
Query: 253 KQYSMPN 273
+ N
Sbjct: 86 LVHGQLN 92
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +1
Query: 154 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLCKP 315
D G+ ++V D + +IG+ + + N +Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 222 RQEPGGDEPQQTIFDAKRLIGRKFEDATVQAD 317
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = +1
Query: 133 KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLCK 312
K+ I+ N +G T YV D + IG+ + + N +Y++ + S+++L +
Sbjct: 5 KLTILDNGEGLFQTHVYVK--DVQEAIGEQMNTESRLGENTKYTVVGDGNGFMSRVVLVE 62
Query: 313 P 315
P
Sbjct: 63 P 63
>Z80220-6|CAB02305.1| 282|Caenorhabditis elegans Hypothetical
protein T08G11.2 protein.
Length = 282
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 168 DHSVLCCVHRHRASHRRCRQEPGGDEPQ 251
D V+CCVH R S+ + Q+ D+ Q
Sbjct: 23 DGEVVCCVHGRRCSYGKGNQDGKRDDNQ 50
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 167 LLPWSLAMISTFPCWKTPTQEY-VVPRSIPTAGAFA 63
+LP A TFPC + EY +VP +P+A A
Sbjct: 287 VLPMRDAATRTFPCMLSALPEYSLVPPQVPSASTSA 322
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 192 HRHRASHRR--CRQEPGGDEPQQTIFDAKRLIGR-KFEDATVQADM 320
H+HR SHR Q+ GDE + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical
protein F35B3.7 protein.
Length = 578
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPNVSSDVSSKMLLCKP 315
R+TP A T +E+ KN+ + N++ S+ SSDVSSK L KP
Sbjct: 20 RSTPQR-AVTQSEKSDKSRNKNE---STNEKKSITVSSSDVSSKTQLTKP 65
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical protein
F29G6.3c protein.
Length = 1453
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 141 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 227
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 141 DHRQRPGQQDHSVLCCVHRHRASHRRCRQ 227
+H Q+ + H+ + VH H +H+ RQ
Sbjct: 1107 EHHQKHVHEQHNYIPAVHHHETNHQLDRQ 1135
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 121 RHQRKSTWYPDRFLLR 74
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
>Z92803-13|CAB07249.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 136 PSRAGRHQRKSTWYPDRFLLRVLL 65
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical
protein C53B4.7e protein.
Length = 394
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 340 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 389
>Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical
protein C53B4.7d protein.
Length = 382
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 328 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 377
>Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical
protein C53B4.7c protein.
Length = 368
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 314 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 363
>Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical
protein C53B4.7b protein.
Length = 399
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 345 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 394
>Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical
protein C53B4.7a protein.
Length = 384
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 330 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 379
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 123 EDTNARVRGTQIDSYCGC 70
ED N+R +++SYCGC
Sbjct: 21 EDLNSRRYRQELESYCGC 38
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 98 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 137
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 384
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 330 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 379
>AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 399
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 166 RTTPSYVAFTDTERLIGDAAKNQVAMNPNKQYSMPN-VSSDVSSKMLLCK 312
+ +P Y T+ E L+G+A K + + + ++P V V+S ++L K
Sbjct: 345 KVSPKYYRPTEVETLLGNAEKAKKTLGWEAKVTVPELVKEMVASDIILMK 394
>AL021482-4|CAA16341.2| 331|Caenorhabditis elegans Hypothetical
protein K01G5.9 protein.
Length = 331
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 136 PSRAGRHQRKSTWYPDRFLLRVLL 65
PSR RH S W+ R LL L+
Sbjct: 87 PSRVARHLAHSNWWKQRRLLHPLI 110
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 67 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYV 186
K A G+ G+ FQ G VE I N GN +P YV
Sbjct: 286 KPMARGVLKGSAERTNFTFQLGDVEHIKNLNGNLRSPKYV 325
>Z70783-4|CAA94854.1| 178|Caenorhabditis elegans Hypothetical
protein ZK856.6 protein.
Length = 178
Score = 25.8 bits (54), Expect = 8.9
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Frame = -3
Query: 240 RHLVLGGISDETLGVCERNIRR-SGPVALVVGDDLHLPVLEDTNARVRGTQIDSY----- 79
R +L G+S++T VC+ IR+ P + + + + +D + + T ++
Sbjct: 59 RKSILVGLSEKTEEVCKTKIRQHHRPQYGHIANGSRVEIQQDEESSLEATFVECLGENRP 118
Query: 78 -CGCFCHXVFLISLVTCS*NNSANVR 4
C H +F+ VT + ANVR
Sbjct: 119 PCHGVDHDLFISECVTVYEHRPANVR 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,389,176
Number of Sequences: 27780
Number of extensions: 176731
Number of successful extensions: 595
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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