Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0551
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...    67   3e-10
UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and...    42   0.013
UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- ...    34   2.6  
UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans mor...    33   4.5  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score = 67.3 bits (157), Expect = 3e-10
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -3

Query: 456  VXLLGEKKQXXDSETXRXTLQKTDDSXVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAX 277
            V LLGEKKQ  DSE  R TL+  DD   + VE   G VFS++N+  L A QQKQFIQTA 
Sbjct: 3203 VLLLGEKKQSKDSEAVRATLEVEDDPFSDAVEFANGVVFSASNYAALPAGQQKQFIQTAA 3262

Query: 276  NTITHKL 256
            + I  ++
Sbjct: 3263 HNIIQRM 3269



 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = -2

Query: 250  EQLXQLCTCTYVDPFRVRSVCVNKDKKDFAQ 158
            EQ+ Q CTC +VDPFRVRSVC NK + + A+
Sbjct: 3272 EQIVQQCTCVFVDPFRVRSVCFNKARTEVAR 3302


>UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)]; n=11;
            Eukaryota|Rep: Apolipophorins precursor (Retinoid- and
            fatty acid-binding glycoprotein) [Contains:
            Apolipophorin-2 (Apolipophorin II) (ApoL2);
            Apolipophorin-1 (Apolipophorin I) (ApoL1)] - Drosophila
            melanogaster (Fruit fly)
          Length = 3351

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = -3

Query: 408  RXTLQKTDDSXVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAXNTITHKL 256
            R  LQ  +D  ++FV   GG+VF++ NFEKL A  QK+ +    +++   L
Sbjct: 3262 RTKLQFDNDMGIDFVLNNGGWVFATQNFEKLKASDQKKMLNQITSSLADTL 3312


>UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1; n=1;
            Apis mellifera|Rep: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1 - Apis
            mellifera
          Length = 3360

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 384  DSXVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAXNTITHKL 256
            D   +F   +GG  FSS NF    + Q+KQF+Q A   I   L
Sbjct: 3277 DVCADFAVFSGGAAFSSNNFLDAKSNQKKQFVQVAAKRIADSL 3319


>UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans
           morsitans|Rep: Lipophorin - Glossina morsitans morsitans
           (Savannah tsetse fly)
          Length = 835

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 408 RXTLQKTDDSXVNFVEGTGGYVFSSTNFEKLNAPQQKQFIQTAXNTITHKL 256
           R  LQ      ++FV   GG++F+  +FE+L  P   + +    N+I   L
Sbjct: 747 RQKLQYESSKSIDFVLNKGGWIFNMQHFEQLKPPDHIKVLNQVANSIADTL 797


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,864,841
Number of Sequences: 1657284
Number of extensions: 4811712
Number of successful extensions: 8781
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8781
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)