Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0549
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.32 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.32 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.73 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 288 TKLASAWLKCQRTPNCTQSCWSHLLC 365
           T L +A   C  TPN T + WSH  C
Sbjct: 131 TVLGAACQVC--TPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 288 TKLASAWLKCQRTPNCTQSCWSHLLC 365
           T L +A   C  TPN T + WSH  C
Sbjct: 131 TVLGAACQVC--TPNATNTVWSHCQC 154


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 243 LKVLKCVKIMYVMYSTKLASAWLKCQRTPNCTQSCWSHL 359
           LK +K ++I  +M +    SA    QRTPN      S+L
Sbjct: 293 LKFIKKIQIFGIMITKACMSASNLIQRTPNICYKLLSNL 331


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 427 SGGVPARKSPNRLQEXDQEGCCVE-SRHQN 513
           SG V  R+ PNR+   +  G  VE S H N
Sbjct: 21  SGPVFVREPPNRIDFSNTTGAVVECSAHGN 50


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 290 EARKRLAEVPKDTKLYSELLVTLI 361
           +A K L   PK  K+YS LL+T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 102 PSHRFLRPF 76
           P HRFL PF
Sbjct: 376 PDHRFLEPF 384


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 385 GTHCHYPRPSNRQGSGGVPARKSPNRLQ 468
           G H     PS   G+GG+P +    R Q
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPSPRSQ 282


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 364 AGSLPAHGTHCHYPRPSNRQGSGGVP 441
           A  +P H ++ HY  P    GS   P
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEETP 57


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 364 AGSLPAHGTHCHYPRPSNRQGSGGVP 441
           A  +P H ++ HY  P    GS   P
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEETP 57


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 364 AGSLPAHGTHCHYPRPSNRQGSGGVP 441
           A  +P H ++ HY  P    GS   P
Sbjct: 32  AQQMPPHYSNYHYEDPYGYTGSEETP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,592
Number of Sequences: 336
Number of extensions: 2800
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)