Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0546
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   0.97 
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   3.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   6.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.8  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.8 bits (49), Expect = 0.97
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 203 YRSTDPYGVLPLWGSNDLN 147
           + + DPYG++  W ++ LN
Sbjct: 139 FSAVDPYGLVAQWATDALN 157


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 24  DVDIRKDLYANTVLSGGTTMYPGI 95
           D D+ KD     VL GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 332 FCCRAS*LKVSTLRSTSC 279
           +CCR S L+  T+  T C
Sbjct: 82  YCCRESFLRERTITLTHC 99


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 42 PYGCPRRTSRR 10
          P GCPRR  R+
Sbjct: 1  PNGCPRRRGRQ 11


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 459 KKTATTTFRSFYVIC 415
           K TA   F SFY IC
Sbjct: 789 KYTAEAGFMSFYEIC 803


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 42  PYGCPRRTSRR 10
           P GCPRR  R+
Sbjct: 152 PNGCPRRRGRQ 162


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 42  PYGCPRRTSRR 10
           P GCPRR  R+
Sbjct: 211 PNGCPRRRGRQ 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,798
Number of Sequences: 336
Number of extensions: 2568
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)