Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0546
(535 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 5e-39
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 7e-39
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 2e-38
SB_56| Best HMM Match : Actin (HMM E-Value=0) 155 2e-38
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 155 2e-38
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 7e-38
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 143 9e-35
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 3e-10
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 55 4e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 35 0.036
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.4
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 4.2
SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 28 4.2
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 27 7.3
SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6) 27 7.3
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 27 9.6
SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09) 27 9.6
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 157 bits (381), Expect = 5e-39
Identities = 74/87 (85%), Positives = 79/87 (90%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 257 MKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIG 316
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 317 GSILASLSTFQQMWISKQEYDESGPAI 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGP+IVHRKCF
Sbjct: 338 ESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 157 bits (380), Expect = 7e-39
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 246 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 305
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 306 GSILASLSTFQQMWISKQEYDESGPAI 332
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGP+IVHRKCF
Sbjct: 327 ESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 155 bits (377), Expect = 2e-38
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIG 343
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSI 370
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 365 ESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 155 bits (377), Expect = 2e-38
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 283 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIG 342
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 343 GSILASLSTFQQMWISKQEYDESGPSI 369
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 364 ESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 155 bits (376), Expect = 2e-38
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 343
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSI 370
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 365 ESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 153 bits (372), Expect = 7e-38
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 283 MKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIG 342
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISKQEY P +
Sbjct: 343 GSILASLSTFQQMWISKQEYDESGPSI 369
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 364 ESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 143 bits (346), Expect = 9e-35
Identities = 65/87 (74%), Positives = 76/87 (87%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIG
Sbjct: 57 MKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIG 116
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K+EY PP+
Sbjct: 117 GSILASLSTFQQMWIAKEEYHEYGPPI 143
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 254 HESGPSIVHRKCF 292
HE GP IVHRKCF
Sbjct: 137 HEYGPPIVHRKCF 149
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = +3
Query: 18 MCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII---APPERKYSVW 188
M D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++K+I + E++++ W
Sbjct: 162 MTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPW 221
Query: 189 IGGSIXASL 215
IGGSI ASL
Sbjct: 222 IGGSILASL 230
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Frame = +3
Query: 21 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIK 152
C +D+R+ LY N VLSGG+TM+ R+Q++I + P ++ +
Sbjct: 234 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQ 293
Query: 153 IIAPPERKYSVWIGGSIXASLSTFQQMXISKQEYTSLVPPL 275
+I+ ++Y+VW GGS+ AS F + +K +Y P +
Sbjct: 294 VISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSI 334
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP- 167
L+C +D RK L N VL GGT M PG R+ +EI L S +K+ PP
Sbjct: 67 LLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPV 126
Query: 168 ERKYSVWIGGSIXASLSTFQQMXISKQEY 254
+ W+GG+I SL +++ Y
Sbjct: 127 NANITAWLGGAIFGSLEVLADRSTTRERY 155
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 24 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 128
D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 290 DIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 35.1 bits (77), Expect = 0.036
Identities = 15/30 (50%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +3
Query: 6 AFSLM-CDVDIRKDLYANTVLSGGTTMYPG 92
AF++ D+D+R+ LY+N VLSGG+T++ G
Sbjct: 262 AFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 202 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 29
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 28 TS 23
S
Sbjct: 815 AS 816
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 54 NTVLSGGTTMYPGIADRMQKEITALAP 134
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 21 CDVDIRKDLYANTVLSG 71
CD+D+R +L+ N VLSG
Sbjct: 2330 CDIDLRAELFHNIVLSG 2346
>SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 719
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 280 VYNGGTRLVYSCFEIXICWKVEREAXIDPPIHTEY 176
+Y GG R V+ +E KVERE ++ I +E+
Sbjct: 280 LYRGGRRNVFKTYEELYLSKVEREDRLEQGIQSEH 314
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 54 WRTSPYGCPRRTSR 13
W SPY CPRR S+
Sbjct: 1115 WMCSPYNCPRRRSK 1128
>SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6)
Length = 181
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 150 KIIAPPERKYSVWIGGSIXASLSTFQQMXISKQEYTSLVP 269
K++ + KY + I G+ L+ F ISK EY S +P
Sbjct: 50 KVVVIVDYKYELDIRGTKFGELTGFDPKVISKTEYGSKLP 89
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 96 RFQGTWWYHRTIRCWRTSPYGCPRR 22
RF+ WY R C R YGCP R
Sbjct: 1613 RFRPQAWYSRV--CLRAEVYGCPDR 1635
>SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09)
Length = 550
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 318 CPTAEPQEGGSNYACDLVNK 377
C + QEGGS +AC+L +K
Sbjct: 68 CQSFNYQEGGSTHACELTSK 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,007
Number of Sequences: 59808
Number of extensions: 290636
Number of successful extensions: 743
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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