Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0546
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         160   2e-41
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         160   2e-41
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         160   2e-41
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          151   2e-38
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.4  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   8.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  160 bits (389), Expect = 2e-41
 Identities = 77/87 (88%), Positives = 79/87 (90%)
 Frame = +3

Query: 15  LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
           + CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 343

Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
           GSI ASLSTFQQM ISKQEY    P +
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSI 370



 Score = 31.1 bits (67), Expect = 0.024
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 257 ESGPSIVHRKCF 292
           ESGPSIVHRKCF
Sbjct: 365 ESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  160 bits (389), Expect = 2e-41
 Identities = 77/87 (88%), Positives = 79/87 (90%)
 Frame = +3

Query: 15  LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
           + CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 343

Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
           GSI ASLSTFQQM ISKQEY    P +
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSI 370



 Score = 31.1 bits (67), Expect = 0.024
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 257 ESGPSIVHRKCF 292
           ESGPSIVHRKCF
Sbjct: 365 ESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  160 bits (389), Expect = 2e-41
 Identities = 77/87 (88%), Positives = 79/87 (90%)
 Frame = +3

Query: 15  LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
           + CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 284 MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 343

Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
           GSI ASLSTFQQM ISKQEY    P +
Sbjct: 344 GSILASLSTFQQMWISKQEYDESGPSI 370



 Score = 31.1 bits (67), Expect = 0.024
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 257 ESGPSIVHRKCF 292
           ESGPSIVHRKCF
Sbjct: 365 ESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  151 bits (365), Expect = 2e-38
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +3

Query: 15  LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
           + CDVDIRKDLYAN+VLSGGTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIG
Sbjct: 284 MRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIG 343

Query: 195 GSIXASLSTFQQMXISKQEY 254
           GSI ASLSTFQ M ISK EY
Sbjct: 344 GSILASLSTFQTMWISKHEY 363



 Score = 27.9 bits (59), Expect = 0.23
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 257 ESGPSIVHRKCF 292
           E GP IVHRKCF
Sbjct: 365 EGGPGIVHRKCF 376


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 493 LVTLINKNLCQKKNGNNNIPFVLRNMHITIPYN 395
           L  L+ KNL   + G N++ + L ++  T+P N
Sbjct: 156 LTILVPKNLSNSQ-GENSVTYTLDDLSNTVPVN 187


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 349 EPPS*GSAVGHHNLKSQRLEALPVYN 272
           +PP  GSA+GH ++ +    A   Y+
Sbjct: 619 QPPPPGSALGHPSIPTSLAAAAAAYS 644


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 481 INKNLCQKKNGNNNIPFVLRNMHITIPYN 395
           +N  +  K    ++ P ++RN+H+ I YN
Sbjct: 216 LNTMIMMKTFLASSYPTLVRNLHMKITYN 244


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,294
Number of Sequences: 2352
Number of extensions: 10376
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)