Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0546
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             149   1e-38
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    24   0.85 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.5  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    21   7.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.9  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  149 bits (362), Expect = 1e-38
 Identities = 71/76 (93%), Positives = 73/76 (96%)
 Frame = +3

Query: 15  LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
           + CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIG
Sbjct: 58  MKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIG 117

Query: 195 GSIXASLSTFQQMXIS 242
           GSI ASLSTFQQM IS
Sbjct: 118 GSILASLSTFQQMWIS 133


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 487 TLINKNLCQKKNGNNNIPFVLRNMHITIP 401
           T I K L   KNGN +   +++ + IT+P
Sbjct: 70  TCIMKLLRTFKNGNFDFDMIVKQLEITMP 98


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 30  DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWI 191
           DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +WI
Sbjct: 349 DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--IWI 398


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 59  RIVRWYHHVPWNRRPYAK 112
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 59  RIVRWYHHVPWNRRPYAK 112
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 42 PYGCPRRTSRR 10
          P GCPRR  R+
Sbjct: 3  PNGCPRRRGRQ 13


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 87 GTWWYHRTIRCWRTSPYGCPRRTSRR 10
          G +++ R  R W     GC  R S R
Sbjct: 14 GLYYHQRCSRDWFRISAGCVSRISNR 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,589
Number of Sequences: 438
Number of extensions: 2982
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)