Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0546
(535 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 146 6e-36
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 146 6e-36
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 146 6e-36
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 146 6e-36
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 144 2e-35
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 144 2e-35
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 141 2e-34
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 141 2e-34
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 135 2e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 134 3e-32
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 126 1e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 111 2e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 9e-18
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 2e-10
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 58 5e-09
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 52 2e-07
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 49 2e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 43 1e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 36 0.017
At5g43500.2 68418.m05318 expressed protein 33 0.12
At5g43500.1 68418.m05319 expressed protein 33 0.12
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 27 5.9
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 27 7.9
At5g24740.1 68418.m02920 expressed protein 27 7.9
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 27 7.9
At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containi... 27 7.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 146 bits (355), Expect = 6e-36
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM ISK EY P +
Sbjct: 345 GSILASLSTFQQMWISKSEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 146 bits (355), Expect = 6e-36
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K EY P +
Sbjct: 345 GSILASLSTFQQMWIAKAEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 146 bits (355), Expect = 6e-36
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K EY P +
Sbjct: 345 GSILASLSTFQQMWIAKAEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 146 bits (355), Expect = 6e-36
Identities = 68/87 (78%), Positives = 75/87 (86%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K EY P +
Sbjct: 345 GSILASLSTFQQMWIAKAEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 68/85 (80%), Positives = 73/85 (85%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVP 269
GSI ASLSTFQQM ISK EY P
Sbjct: 345 GSILASLSTFQQMWISKAEYDEAGP 369
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
E+GP IVHRKCF
Sbjct: 366 EAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 144 bits (350), Expect = 2e-35
Identities = 68/85 (80%), Positives = 73/85 (85%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVP 269
GSI ASLSTFQQM ISK EY P
Sbjct: 345 GSILASLSTFQQMWISKAEYDEAGP 369
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
E+GP IVHRKCF
Sbjct: 366 EAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 141 bits (342), Expect = 2e-34
Identities = 66/87 (75%), Positives = 73/87 (83%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K EY P +
Sbjct: 345 GSILASLSTFQQMWIAKAEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 141 bits (342), Expect = 2e-34
Identities = 66/87 (75%), Positives = 73/87 (83%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLSTFQQM I+K EY P +
Sbjct: 345 GSILASLSTFQQMWIAKAEYDESGPSI 371
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
ESGPSIVHRKCF
Sbjct: 366 ESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 135 bits (326), Expect = 2e-32
Identities = 61/80 (76%), Positives = 69/80 (86%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+G
Sbjct: 286 MKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVG 345
Query: 195 GSIXASLSTFQQMXISKQEY 254
GSI ASLS+F M I+K EY
Sbjct: 346 GSILASLSSFAPMWITKAEY 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 134 bits (325), Expect = 3e-32
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CDVDIRKDLY N VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIG
Sbjct: 285 MKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIG 344
Query: 195 GSIXASLSTFQQMXISK 245
GSI ASLSTFQQ+ I +
Sbjct: 345 GSILASLSTFQQVKIDQ 361
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 126 bits (303), Expect = 1e-29
Identities = 59/87 (67%), Positives = 69/87 (79%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
+ CD DIRKDLY N VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIG
Sbjct: 237 MKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIG 296
Query: 195 GSIXASLSTFQQMXISKQEYTSLVPPL 275
GSI ASLST++QM I+K EY P +
Sbjct: 297 GSILASLSTYEQMWITKAEYEENGPAI 323
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 111 bits (268), Expect = 2e-25
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +3
Query: 15 LMCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 194
L C VD R+D+Y N +++GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIG
Sbjct: 274 LKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIG 333
Query: 195 GSIXASLSTFQQMXISKQEY 254
GSI ASLSTF QM I+K EY
Sbjct: 334 GSILASLSTFHQMWITKDEY 353
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 9e-18
Identities = 38/81 (46%), Positives = 60/81 (74%), Gaps = 3/81 (3%)
Frame = +3
Query: 21 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWI 191
CDVDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A ER++SVWI
Sbjct: 348 CDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWI 407
Query: 192 GGSIXASLSTFQQMXISKQEY 254
GGSI ASL +FQQM SK EY
Sbjct: 408 GGSILASLGSFQQMWFSKSEY 428
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +3
Query: 21 CDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGS 200
C ++ LY + +L+GG+T++P + +R++ E+ L P +KI + VW GGS
Sbjct: 330 CHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGS 389
Query: 201 IXASLSTFQQMXISKQEYTSL 263
+ AS F+ M ++K EY L
Sbjct: 390 LLASSPDFESMCVTKAEYEEL 410
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 12/89 (13%)
Frame = +3
Query: 24 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPE 170
D+D R LY + VLSGG+TMYPG+ R++KEI T L + ++++I PP
Sbjct: 287 DIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPR 346
Query: 171 RKYSVWIGGSIXAS-LSTFQQMXISKQEY 254
RK+ V++GG++ A + + I++++Y
Sbjct: 347 RKHMVYLGGAVLAGIMKDAPEFWINREDY 375
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 39 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGS 200
+ L NTVL GGTT G R QKE L S ++ ++ PPE YS W+GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 201 IXASLSTFQQMXISKQEYTSLVP 269
I A + Q ++K +Y P
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGP 355
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 257 ESGPSIVHRKCF 292
E+GPS+VHRKCF
Sbjct: 352 ETGPSVVHRKCF 363
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Frame = +3
Query: 27 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS----------------TMKIKII 158
+D R+ LY N VLSGG+TM+ R+Q+++ + + +++ ++
Sbjct: 318 IDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVV 377
Query: 159 APPERKYSVWIGGSIXASLSTFQQMXISKQEY 254
+ P ++++VW GGS+ +S F +K+EY
Sbjct: 378 SHPVQRFAVWFGGSVLSSTPEFFASCRTKEEY 409
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Frame = +3
Query: 48 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSIXASLST 221
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + W G + ++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 222 F 224
F
Sbjct: 452 F 452
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/75 (21%), Positives = 37/75 (49%)
Frame = +3
Query: 30 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIXA 209
++ + L ++ +++GG ++ PG+ +R++ I + P I ++ + W G S A
Sbjct: 632 ELEERLTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
Query: 210 SLSTFQQMXISKQEY 254
+ F +K +Y
Sbjct: 692 ANLNFLGNAFTKMDY 706
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 27 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIG 194
+D+R+ L+++ L GG + G+ +++ + P T I + + E ++ W G
Sbjct: 476 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 535
Query: 195 GSIXASLSTFQQMXISKQEY 254
G+I L ++ I + ++
Sbjct: 536 GAILGILDFGREAWIERHQW 555
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 33.1 bits (72), Expect = 0.12
Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +3
Query: 27 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIG 194
+D+R+ L+++ L GG + G+ +++ + P T I + + E ++ W G
Sbjct: 488 IDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKG 547
Query: 195 GSIXASLSTFQQMXISKQEY 254
G+I L ++ I + ++
Sbjct: 548 GAILGILDFGREAWIERHQW 567
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 191 DPYGVLPLWGSNDLNLHCRW 132
DP GVL W S+ + HC W
Sbjct: 45 DPNGVLSSWVSDSSSNHCSW 64
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 197 STDPYGVLPLWGSNDLNLHCRWXE-SCDFLLHTVGDS 90
S DP GVL W HC W +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 238 IXICWKVEREAXIDPPIHTEYFLSGGAMILI 146
I + W +ERE ++ IHT+ SGG + +I
Sbjct: 3201 IDLVWNIEREIGLESVIHTD--CSGGVVRII 3229
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 200 RSTDPYGV--LPLWGSNDLNLHCRWXESCDFLL 108
+S DP GV LP+ S DL L C W ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
>At1g03560.1 68414.m00337 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 660
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 241 EIXICWKVEREAXIDPPIHTEYFLSGGAMILIFIVDGARAV 119
E+ W+ +E I+P ++T FL G + +F VD A V
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF-VDSAERV 244
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,685,888
Number of Sequences: 28952
Number of extensions: 204945
Number of successful extensions: 500
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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