Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0545
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74036-4|CAE17849.1|  112|Caenorhabditis elegans Hypothetical pr...    42   2e-04
AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical...    28   4.4  
AF106573-5|AAF02104.2|  358|Caenorhabditis elegans Seven tm rece...    27   5.8  

>Z74036-4|CAE17849.1|  112|Caenorhabditis elegans Hypothetical
           protein F55C10.5 protein.
          Length = 112

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = +1

Query: 328 HVNFSDKGEVKXRRKKFLTAKYGSHHMALIRXXXAVEMWLYDELHFLYEIPKXSN 492
           H  F D       R + LT KYG H MALIR    VE W+  E+  L+   + +N
Sbjct: 7   HARFGDSKSRMEDRSRVLTMKYGKHQMALIRKRMKVENWIETEVTKLFNGNETNN 61


>AL033514-12|CAA22099.1|  208|Caenorhabditis elegans Hypothetical
           protein Y75B8A.11 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 151 TLRGCSTQHNT--TTVMSMITHLTLAEAFAVHNVRMRRRC 38
           T+  C+++ N   T+  S I H  L  A  +  +R RRRC
Sbjct: 118 TVPACTSKKNVLLTSTTSTINHQKLEPATTLSPIRQRRRC 157


>AF106573-5|AAF02104.2|  358|Caenorhabditis elegans Seven tm
           receptor protein 79 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 30  FESHRRRIRTLCTAKASASVKCVIIDITVV 119
           F+++R  I  LC  K +  ++C +I++T V
Sbjct: 309 FKNYRLYILKLCRRKIAQKIRCSVIEMTTV 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,778,023
Number of Sequences: 27780
Number of extensions: 143246
Number of successful extensions: 399
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 399
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)