Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0542
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0087 + 1245890-1246565,1247409-1247484,1247774-1247893,124... 66 3e-11
04_04_0574 + 26338567-26338819,26338918-26338989,26339077-263391... 38 0.005
03_02_0797 - 11296426-11297258,11297745-11297901 32 0.34
09_04_0183 + 15389691-15390197,15391259-15391582 32 0.45
02_04_0266 - 21415912-21418563 30 1.8
09_02_0366 + 7941550-7942161,7942230-7942775 29 2.4
07_01_0521 + 3867922-3867967,3868282-3868544,3868680-3868744,386... 29 2.4
01_02_0078 - 10894871-10895841,10897268-10898426 29 2.4
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 29 3.2
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 29 3.2
09_02_0124 - 4546722-4547107,4547677-4547854,4548027-4548215,454... 29 3.2
02_01_0779 - 5812730-5813458 29 3.2
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 28 7.4
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196 28 7.4
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 28 7.4
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 28 7.4
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 28 7.4
05_05_0129 - 22594527-22594922 28 7.4
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 28 7.4
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 28 7.4
01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676 28 7.4
11_06_0732 - 26740718-26741704,26741876-26742478 27 9.7
10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505 27 9.7
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515 27 9.7
05_03_0226 - 10645036-10646001,10646313-10646828,10646905-106472... 27 9.7
>09_01_0087 +
1245890-1246565,1247409-1247484,1247774-1247893,
1248927-1249002,1250767-1250835,1251019-1251099,
1251298-1251369,1251600-1251692,1251904-1252083,
1252558-1252641,1252729-1252872,1253089-1253178,
1255982-1256064,1256140-1256421,1256722-1256959,
1258307-1258957
Length = 1004
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = +1
Query: 271 IHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILNTTHTALLFSLV 450
+ RLVH N+ V AL LL+QIS + SDR+Y ALY KL + + ++ L L+
Sbjct: 506 LFRLVHSVNFNVGVQALMLLYQISTKNQIASDRFYRALYAKLLSPASVTSSKPELFLGLL 565
Query: 451 YKSLKQDKNIPRVVAFVKR 507
K++K D + RV AF KR
Sbjct: 566 VKAMKNDVMLKRVAAFAKR 584
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +2
Query: 5 EIEKMLFRTNISPRAQYYGVCFLNQFYLGK--DDSKVAESLIRIYFSFFK 148
E++ LFR ++ RA+Y V FL+Q +L D K+A+ L+ +Y + FK
Sbjct: 372 EVDSFLFRPHVGLRAKYQAVNFLSQIFLTSKGDGPKIAKRLVDVYIALFK 421
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2
Query: 167 EIDSRLMSAILTGVKRAYPF 226
E+DSR++SA+LTGV RA P+
Sbjct: 470 EMDSRILSALLTGVNRALPY 489
>04_04_0574 +
26338567-26338819,26338918-26338989,26339077-26339135,
26339229-26339288,26339304-26339364,26339496-26339592,
26339684-26339750,26340123-26340311,26340404-26340639,
26340747-26340848,26340981-26341092
Length = 435
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 312 ARSGSAVPNQRRLHRDQRPVLLGLIQEADELRHIEHY 422
AR GS+ N + D PVLLGL++E ELRH H+
Sbjct: 82 ARHGSSTANLLQALEDYLPVLLGLVKEGSELRHGVHF 118
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 300 QHIRARSGSAVPNQRRLHRDQRPVLLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEH 479
QH+ R+ + + N R + L + + + + Y L+ R+Q A AGQ+
Sbjct: 102 QHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAAGQQQ 161
Query: 480 SQGGG 494
Q GG
Sbjct: 162 QQEGG 166
>09_04_0183 + 15389691-15390197,15391259-15391582
Length = 276
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +1
Query: 370 YYSALYKKLTNSDILNTTHTALLFSLVYKSLKQDKNIPRVVAFVKRRSSCAATCCRP 540
Y + L K++ NS N + L S V K L QDKN R F S + CC+P
Sbjct: 120 YSNWLQKRMENSKNWNRIRSCLQDSKVCKKL-QDKNWDRTQFFKADLSPLESGCCKP 175
>02_04_0266 - 21415912-21418563
Length = 883
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = -3
Query: 590 WRSPSDLRQEEDHPAGLGRQHVAAQLERRLTKATTLGMF 474
W+ P+ R++ED+P +G ++V + + +G+F
Sbjct: 562 WKMPTGCREQEDNPFAVGNKNVGLGFSQVIQDHVVVGIF 600
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +3
Query: 297 HQHIR--ARSGSAVPNQRRLHRDQRPVLLGLIQEADELRHIEHYAHGSALLARLQVAE-A 467
HQH+ + G DQ +LL L H +H+ HG+A + A +
Sbjct: 12 HQHVAPPTKHGGGGAGAGGEEDDQSMLLLSLWPPGHSSHHHQHHHHGAASSSACSSASIS 71
Query: 468 GQEHSQGGG 494
HS GGG
Sbjct: 72 AAAHSGGGG 80
>07_01_0521 +
3867922-3867967,3868282-3868544,3868680-3868744,
3868828-3868990,3869798-3869946,3870041-3870289,
3870860-3871028,3871110-3871202,3871703-3871952,
3872127-3872217,3872673-3872769
Length = 544
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 FQISDASTGTSDRYYSALYKKLTNSD-ILNTTHTALLFSLVYKSLKQDKNIPRVVAFVK 504
+Q+ + TS+RY+ KKL N+D I + + F++ L D V FV+
Sbjct: 21 YQVGSSKVDTSERYFDEWQKKLPNTDEIRKSKPRSRYFTISGVELSPDNMAVATVYFVQ 79
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 213 APTRSPIRSGSRRLGPHRLDPPACAPGRHQ 302
AP R IR R P LDPP+ GRH+
Sbjct: 626 APRRRQIRRCRHRYSPPSLDPPSPELGRHR 655
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 502 KRRSSCAATCCRPRPAG*SSSCRRSEGLLQEGGHQTCMEQN 624
K R++C C+ + S C S GLL H TC+ +N
Sbjct: 521 KERTACQCKECKCKNTWGSYECGCSGGLLYMKEHDTCISKN 561
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 502 KRRSSCAATCCRPRPAG*SSSCRRSEGLLQEGGHQTCMEQN 624
K R++C C+ + S C S GLL H TC+ +N
Sbjct: 521 KERTACQCKECKCKNTWGSYECGCSGGLLYMKEHDTCISKN 561
>09_02_0124 -
4546722-4547107,4547677-4547854,4548027-4548215,
4548602-4548712,4549024-4549071,4549825-4549966,
4550349-4550695
Length = 466
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 417 HYAHGSALLARLQVAEAGQEHS 482
HY HG +LA LQ+ A +EH+
Sbjct: 320 HYVHGRHVLAHLQILLAAREHN 341
>02_01_0779 - 5812730-5813458
Length = 242
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3
Query: 339 QRRLHRDQRPVLLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEHSQGGGLR*AAL 512
+R HR +R G A + H+A G+ LLAR + A AG G L AAL
Sbjct: 37 RRAAHRLRRASSAGS-SSAAAAQSRRHFAQGAQLLARARAAAAGGTKKPPGPLARAAL 93
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 112
>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
Length = 676
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 112
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 501 NEGHHPGNVLVLLQRLVNEREEQS 430
N+GHHPG + + V ERE +S
Sbjct: 47 NDGHHPGAAVGMSSASVAERERES 70
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 112
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 76 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 107
>05_05_0129 - 22594527-22594922
Length = 131
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 222 RSPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSAVPNQRR 347
R+ S G ++ PPA P R H R+G AV R
Sbjct: 81 RAAAEEASAAAGVPQIRPPAAPPPRPSHAVGRAGMAVDGSTR 122
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 72 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 103
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR + R G
Sbjct: 60 PIRAGSRSTVPPSRPPPAAGGGRGRSRGGRGG 91
>01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676
Length = 383
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/58 (27%), Positives = 22/58 (37%)
Frame = +1
Query: 427 TALLFSLVYKSLKQDKNIPRVVAFVKRRSSCAATCCRPRPAG*SSSCRRSEGLLQEGG 600
TAL+ + + P ++ AA C PR G S RR+ Q GG
Sbjct: 22 TALIVFVFTSTASPAWPTPEATPATRQEKKAAAVACAPRAKGIDSETRRAARTNQTGG 79
>11_06_0732 - 26740718-26741704,26741876-26742478
Length = 529
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGSSRGGRGG 112
>10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505
Length = 916
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGSSRGGRGG 112
>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
Length = 916
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGSSRGGRGG 112
>05_03_0226 -
10645036-10646001,10646313-10646828,10646905-10647210,
10647382-10647984
Length = 796
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 228 PIRSGSRRLGPHRLDPPACAPGRHQHIRARSG 323
PIR+GSR P PPA GR R G
Sbjct: 81 PIRAGSRSTVPPSRPPPAAGGGRGSSRGGRGG 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,108,594
Number of Sequences: 37544
Number of extensions: 391029
Number of successful extensions: 1291
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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