BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0542 (649 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT023839-1|AAZ86760.1| 1174|Drosophila melanogaster IP14658p pro... 69 5e-12 AY118639-1|AAM50008.1| 1173|Drosophila melanogaster SD02424p pro... 69 5e-12 AE014296-1891|AAF50106.3| 1174|Drosophila melanogaster CG7839-PA... 69 5e-12 AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA... 31 1.3 AJ272390-1|CAB75849.1| 173|Drosophila melanogaster tip associat... 30 3.1 AY069415-1|AAL39560.1| 269|Drosophila melanogaster LD11064p pro... 28 9.5 AJ318090-1|CAC41645.1| 672|Drosophila melanogaster nuclear RNA ... 28 9.5 AJ251947-1|CAB64382.2| 672|Drosophila melanogaster tip associat... 28 9.5 AE014298-1507|AAF47959.3| 672|Drosophila melanogaster CG1664-PA... 28 9.5 AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA... 28 9.5 >BT023839-1|AAZ86760.1| 1174|Drosophila melanogaster IP14658p protein. Length = 1174 Score = 68.9 bits (161), Expect = 5e-12 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +1 Query: 265 DSIHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILN--TTHTALL 438 D+I+RLVHLA I ++V L LL Q+ T SDR+Y+ALY KL + +++N + A L Sbjct: 568 DTIYRLVHLADIRVAVQTLGLLLQLVAVKTEKSDRFYNALYVKLLDLNLINVGSKTAAHL 627 Query: 439 FSLVYKSLKQDKNIPRVVAFVKR 507 +V++++ D ++ R AFVKR Sbjct: 628 LHIVHRAIHIDNHVARAQAFVKR 650 Score = 61.7 bits (143), Expect = 8e-10 Identities = 30/72 (41%), Positives = 46/72 (63%) Frame = +2 Query: 2 AEIEKMLFRTNISPRAQYYGVCFLNQFYLGKDDSKVAESLIRIYFSFFKASIKKGEIDSR 181 AE EK+LFR NIS RAQ++ +CFL+ +V L+ I F+ FK ++KG +++R Sbjct: 477 AEAEKLLFRNNISERAQHFALCFLSSI-APSGRPEVCTKLVNICFALFKVLVQKGAVNNR 535 Query: 182 LMSAILTGVKRA 217 M AIL +++A Sbjct: 536 TMQAILRCLQKA 547 >AY118639-1|AAM50008.1| 1173|Drosophila melanogaster SD02424p protein. Length = 1173 Score = 68.9 bits (161), Expect = 5e-12 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +1 Query: 265 DSIHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILN--TTHTALL 438 D+I+RLVHLA I ++V L LL Q+ T SDR+Y+ALY KL + +++N + A L Sbjct: 568 DTIYRLVHLADIRVAVQTLGLLLQLVAVKTEKSDRFYNALYVKLLDLNLINVGSKTAAHL 627 Query: 439 FSLVYKSLKQDKNIPRVVAFVKR 507 +V++++ D ++ R AFVKR Sbjct: 628 LHIVHRAIHIDNHVARAQAFVKR 650 Score = 61.7 bits (143), Expect = 8e-10 Identities = 30/72 (41%), Positives = 46/72 (63%) Frame = +2 Query: 2 AEIEKMLFRTNISPRAQYYGVCFLNQFYLGKDDSKVAESLIRIYFSFFKASIKKGEIDSR 181 AE EK+LFR NIS RAQ++ +CFL+ +V L+ I F+ FK ++KG +++R Sbjct: 477 AEAEKLLFRNNISERAQHFALCFLSSI-APSGRPEVCTKLVNICFALFKVLVQKGAVNNR 535 Query: 182 LMSAILTGVKRA 217 M AIL +++A Sbjct: 536 TMQAILRCLQKA 547 >AE014296-1891|AAF50106.3| 1174|Drosophila melanogaster CG7839-PA protein. Length = 1174 Score = 68.9 bits (161), Expect = 5e-12 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = +1 Query: 265 DSIHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILN--TTHTALL 438 D+I+RLVHLA I ++V L LL Q+ T SDR+Y+ALY KL + +++N + A L Sbjct: 568 DTIYRLVHLADIRVAVQTLGLLLQLVAVKTEKSDRFYNALYVKLLDLNLINVGSKTAAHL 627 Query: 439 FSLVYKSLKQDKNIPRVVAFVKR 507 +V++++ D ++ R AFVKR Sbjct: 628 LHIVHRAIHIDNHVARAQAFVKR 650 Score = 61.7 bits (143), Expect = 8e-10 Identities = 30/72 (41%), Positives = 46/72 (63%) Frame = +2 Query: 2 AEIEKMLFRTNISPRAQYYGVCFLNQFYLGKDDSKVAESLIRIYFSFFKASIKKGEIDSR 181 AE EK+LFR NIS RAQ++ +CFL+ +V L+ I F+ FK ++KG +++R Sbjct: 477 AEAEKLLFRNNISERAQHFALCFLSSI-APSGRPEVCTKLVNICFALFKVLVQKGAVNNR 535 Query: 182 LMSAILTGVKRA 217 M AIL +++A Sbjct: 536 TMQAILRCLQKA 547 >AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA protein. Length = 2517 Score = 31.1 bits (67), Expect = 1.3 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = +3 Query: 189 QRY*RASNAPTRSPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSAVPNQRRLHRDQRP 368 +R+ ++N+P RSP++ RR+ PH P H + S++PN++ DQ Sbjct: 1051 RRHPTSANSPKRSPLKIARRRIHPHLHLGKIWQPSGHS-TPSSGQSSLPNRKTDFYDQLG 1109 Query: 369 VL 374 ++ Sbjct: 1110 II 1111 >AJ272390-1|CAB75849.1| 173|Drosophila melanogaster tip associating protein protein. Length = 173 Score = 29.9 bits (64), Expect = 3.1 Identities = 12/49 (24%), Positives = 26/49 (53%) Frame = +2 Query: 494 PSLSGAPAVLLRAAGPGLRDDLPPVEGLKDSSKKEAIKLVWNKTEVKEE 640 P SG+ A+ A PG +D+ ++ ++ S + + ++W++ EE Sbjct: 97 PVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKRCLEE 145 >AY069415-1|AAL39560.1| 269|Drosophila melanogaster LD11064p protein. Length = 269 Score = 28.3 bits (60), Expect = 9.5 Identities = 11/48 (22%), Positives = 27/48 (56%) Frame = +2 Query: 494 PSLSGAPAVLLRAAGPGLRDDLPPVEGLKDSSKKEAIKLVWNKTEVKE 637 P SG+ A+ A PG +D+ ++ ++ S + + ++W++ ++E Sbjct: 194 PVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEE 241 >AJ318090-1|CAC41645.1| 672|Drosophila melanogaster nuclear RNA export factor 1 (NXF1) protein. Length = 672 Score = 28.3 bits (60), Expect = 9.5 Identities = 11/48 (22%), Positives = 27/48 (56%) Frame = +2 Query: 494 PSLSGAPAVLLRAAGPGLRDDLPPVEGLKDSSKKEAIKLVWNKTEVKE 637 P SG+ A+ A PG +D+ ++ ++ S + + ++W++ ++E Sbjct: 597 PVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEE 644 >AJ251947-1|CAB64382.2| 672|Drosophila melanogaster tip associating protein protein. Length = 672 Score = 28.3 bits (60), Expect = 9.5 Identities = 11/48 (22%), Positives = 27/48 (56%) Frame = +2 Query: 494 PSLSGAPAVLLRAAGPGLRDDLPPVEGLKDSSKKEAIKLVWNKTEVKE 637 P SG+ A+ A PG +D+ ++ ++ S + + ++W++ ++E Sbjct: 597 PVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEE 644 >AE014298-1507|AAF47959.3| 672|Drosophila melanogaster CG1664-PA protein. Length = 672 Score = 28.3 bits (60), Expect = 9.5 Identities = 11/48 (22%), Positives = 27/48 (56%) Frame = +2 Query: 494 PSLSGAPAVLLRAAGPGLRDDLPPVEGLKDSSKKEAIKLVWNKTEVKE 637 P SG+ A+ A PG +D+ ++ ++ S + + ++W++ ++E Sbjct: 597 PVNSGSAAISTTAVAPGAQDESTKMQMIEAMSAQSQMNVIWSRKCLEE 644 >AE014296-910|AAF47948.2| 4390|Drosophila melanogaster CG17150-PA, isoform A protein. Length = 4390 Score = 28.3 bits (60), Expect = 9.5 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 415 NTTHTALLFSLVYKSLKQDKNIPRVVAFVKR 507 + T + F +V KSL+ DK +P V AF+ R Sbjct: 3719 HNTVNDMYFLIVIKSLRPDKLVPAVRAFITR 3749 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,931,574 Number of Sequences: 53049 Number of extensions: 607232 Number of successful extensions: 1974 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1833 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1971 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2744900550 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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