Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0542
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein. 27 8.7
AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein. 27 8.7
>Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical
protein F23B12.7 protein.
Length = 953
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +2
Query: 5 EIEKMLFRTNISPRAQYYGVCFLNQFYLGKDDSKVAESLIRIYFSFFKASIKKGEIDSRL 184
EIE++ FR N++ RA Y + FL+Q K DS + L+ IY S FK + K D+RL
Sbjct: 343 EIERLAFRKNVNERAHLYAMTFLSQMKFSKKDSDLCCRLMSIYLSLFKTIVGKKITDNRL 402
Query: 185 MSAILTGVKRAYPFA 229
+ IL G RA+PFA
Sbjct: 403 LPIILAGANRAFPFA 417
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +1
Query: 256 DHIDSIHRLVHLAGINISVHALALLFQISDASTGTSDRYYSALYKKLTNSDILNTTHTAL 435
+ + ++ L H + ++ AL LLFQ + SDR+Y+ALY+KL D A
Sbjct: 425 EDVKDVYFLAHNSNYRTAIPALKLLFQFHKMNDYVSDRFYNALYRKLL--DNCPAGAYAQ 482
Query: 436 LFSLVYKSLKQDKNIPRVVAFVKR 507
L L++ ++K+D + RV FVKR
Sbjct: 483 LLKLMFDTMKEDSSAQRVRTFVKR 506
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 333 PNQRRLHRDQRPVLLGLIQEADELRHIEHYAHGSALLARLQVAE 464
P + RD L L EADEL+ EH G + AR +VAE
Sbjct: 783 PEDKAAERDLAEKLGKLRDEADELKGQEHEMDGQLIEARRKVAE 826
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 201 RASNAPTRSPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSAVPNQRR 347
++ AP R SGS+ P R PA AP R Q + R P +RR
Sbjct: 459 KSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRS---PRRRR 504
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 122 SNSPLLWNRLYPNRTDSGNTRRSIAR 45
+N+PL+WN N T+ G T R
Sbjct: 216 TNNPLMWNSFIYNLTEDGRTHEKCLR 241
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 122 SNSPLLWNRLYPNRTDSGNTRRSIAR 45
+N+PL+WN N T+ G T R
Sbjct: 216 TNNPLMWNSFIYNLTEDGRTHEKCLR 241
>Z48241-4|CAA88284.1| 468|Caenorhabditis elegans Hypothetical
protein C32A3.1b protein.
Length = 468
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 204 ASNAPTR-SPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSA---VPNQRRLHRDQRPV 371
+S +PT+ SP+ R+ P PPA P ++ + Q+ + R ++
Sbjct: 286 SSESPTKQSPMEMNGDRM-PSTAPPPAQNPQHIAQLQQQQNKMRLMQQQQQEMQRIEQQR 344
Query: 372 LLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEHSQGGG 494
++Q+ + + EH L + Q + Q H GG
Sbjct: 345 RQQIMQQQQQQQQQEHQRQQMLLQQQQQQQQMQQHHQMNGG 385
>Z48241-3|CAC42265.1| 490|Caenorhabditis elegans Hypothetical
protein C32A3.1a protein.
Length = 490
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 204 ASNAPTR-SPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSA---VPNQRRLHRDQRPV 371
+S +PT+ SP+ R+ P PPA P ++ + Q+ + R ++
Sbjct: 308 SSESPTKQSPMEMNGDRM-PSTAPPPAQNPQHIAQLQQQQNKMRLMQQQQQEMQRIEQQR 366
Query: 372 LLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEHSQGGG 494
++Q+ + + EH L + Q + Q H GG
Sbjct: 367 RQQIMQQQQQQQQQEHQRQQMLLQQQQQQQQMQQHHQMNGG 407
>AF241847-1|AAF71523.1| 468|Caenorhabditis elegans LAG-3B protein.
Length = 468
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 204 ASNAPTR-SPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSA---VPNQRRLHRDQRPV 371
+S +PT+ SP+ R+ P PPA P ++ + Q+ + R ++
Sbjct: 286 SSESPTKQSPMEMNGDRM-PSTAPPPAQNPQHIAQLQQQQNKMRLMQQQQQEMQRIEQQR 344
Query: 372 LLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEHSQGGG 494
++Q+ + + EH L + Q + Q H GG
Sbjct: 345 RQQIMQQQQQQQQQEHQRQQMLLQQQQQQQQMQQHHQMNGG 385
>AF241846-1|AAF71522.1| 490|Caenorhabditis elegans LAG-3A protein.
Length = 490
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Frame = +3
Query: 204 ASNAPTR-SPIRSGSRRLGPHRLDPPACAPGRHQHIRARSGSA---VPNQRRLHRDQRPV 371
+S +PT+ SP+ R+ P PPA P ++ + Q+ + R ++
Sbjct: 308 SSESPTKQSPMEMNGDRM-PSTAPPPAQNPQHIAQLQQQQNKMRLMQQQQQEMQRIEQQR 366
Query: 372 LLGLIQEADELRHIEHYAHGSALLARLQVAEAGQEHSQGGG 494
++Q+ + + EH L + Q + Q H GG
Sbjct: 367 RQQIMQQQQQQQQQEHQRQQMLLQQQQQQQQMQQHHQMNGG 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,320,712
Number of Sequences: 27780
Number of extensions: 289212
Number of successful extensions: 906
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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