Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0541
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    25   1.5  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    25   1.5  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   4.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         24   4.4  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  LSIAIAVYCTFGLQFFVCXD 79
           + +A+  +C+ GL F++C +
Sbjct: 263 IGLAVTAFCSVGLLFYICDE 282


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 44  CTFGLQFFVCXDIMWNGIKDK 106
           CTF + +  C DI WN   D+
Sbjct: 114 CTFSIVYRDCPDIYWNYQNDR 134


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 304 KYLIWKNILVVIFGTFSLVF 363
           ++ +W   +  IFGTF ++F
Sbjct: 463 RFFLWVFTISCIFGTFGIIF 482


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 30  PLQYTALLACSSSCAXTLCGT 92
           PL   +  +CSSS A +LC T
Sbjct: 240 PLSTASSASCSSSAAGSLCPT 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,098
Number of Sequences: 2352
Number of extensions: 9373
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)