Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0540
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 160 7e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 7e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 144 5e-35
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 91 8e-19
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 84 7e-17
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 66 2e-11
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.1
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.1
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 4.9
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 28 4.9
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 4.9
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 4.9
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.5
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 27 8.6
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 27 8.6
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 8.6
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 160 bits (389), Expect = 7e-40
Identities = 74/83 (89%), Positives = 81/83 (97%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++FK+KYKKD+ NKRA+RRLRTACERA
Sbjct: 211 TIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERA 270
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSSSTQASIEIDSLFEGIDF
Sbjct: 271 KRTLSSSTQASIEIDSLFEGIDF 293
Score = 147 bits (356), Expect = 7e-36
Identities = 73/86 (84%), Positives = 78/86 (90%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYG
Sbjct: 125 TKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
LDKK ERNVLI+ LGGGTFDVS L
Sbjct: 185 LDKKVGVERNVLIYDLGGGTFDVSVL 210
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G +TSITRARFEELN DLF+ T EPVE+++R
Sbjct: 290 GIDFYTSITRARFEELNQDLFKKTTEPVEQAIR 322
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (375), Expect = 3e-38
Identities = 72/84 (85%), Positives = 80/84 (95%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 TIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACER 436
TI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV EFKRKYKKD++ N RA+RRLRTACER
Sbjct: 211 TIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACER 270
Query: 437 AKRTLSSSTQASIEIDSLFEGIDF 508
AKRTLSSST+ASIE+DSLFEGIDF
Sbjct: 271 AKRTLSSSTEASIEVDSLFEGIDF 294
Score = 149 bits (362), Expect = 1e-36
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGL
Sbjct: 126 KMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGL 185
Query: 186 DKKGTGERNVLIFXLGGGTFDVSSL 260
DK +GE+NVLIF LGGGTFDVS L
Sbjct: 186 DKSLSGEKNVLIFDLGGGTFDVSIL 210
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSL 591
G +T I+RARFE+L +DLF S ++PV K+L
Sbjct: 291 GIDFYTKISRARFEDLCSDLFLSCLDPVNKAL 322
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 150 bits (364), Expect = 7e-37
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++FK+KYKKD+ NKRALRRLRTACERA
Sbjct: 304 SIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERA 363
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSSSTQASIEIDSL++GIDF
Sbjct: 364 KRTLSSSTQASIEIDSLYDGIDF 386
Score = 147 bits (356), Expect = 7e-36
Identities = 74/85 (87%), Positives = 76/85 (89%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 219 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGL 278
Query: 186 DKKGTGERNVLIFXLGGGTFDVSSL 260
DKK ERNVLIF LGGGTFDVS L
Sbjct: 279 DKKVGQERNVLIFDLGGGTFDVSVL 303
Score = 68.5 bits (160), Expect = 4e-12
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 116
KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 151 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G +TSITRARFEE+NA LF+ T+EPVEK+++
Sbjct: 383 GIDFYTSITRARFEEMNAHLFKKTLEPVEKAIK 415
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 144 bits (349), Expect = 5e-35
Identities = 69/86 (80%), Positives = 78/86 (90%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG
Sbjct: 823 TKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYG 882
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
+DKK GE+N+L+F LGGGTFDVS L
Sbjct: 883 MDKK-EGEKNILVFDLGGGTFDVSLL 907
Score = 101 bits (241), Expect = 6e-22
Identities = 44/87 (50%), Positives = 65/87 (74%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TI++G+FEV +T GDTHLGGEDFD ++ HF++ +K+K K++ + RA+++LR E+A
Sbjct: 908 TIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKA 967
Query: 440 KRTLSSSTQASIEIDSLFEGIDFTRQL 520
KR LS+ QA +EI+S FEG DF+ L
Sbjct: 968 KRALSTQHQARVEIESFFEGEDFSEML 994
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1
Query: 517 ITRARFEELNADLFRSTMEPVEKSL 591
+TRARFEELNA LF+ST++PV+K L
Sbjct: 994 LTRARFEELNAKLFKSTLKPVQKVL 1018
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 90.6 bits (215), Expect = 8e-19
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL
Sbjct: 156 KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGL 215
Query: 186 DKKGTGERNVLIFXLGGGTFDVSSL 260
KK G NV++ LGGGT DVS L
Sbjct: 216 HKK-EGVANVMVVDLGGGTLDVSLL 239
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
I+ G+F + AG+ LGG+DF+ R + + +Q +++ + L T ++RLR E AK
Sbjct: 241 IQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLIHKRFNRQL-TCSEDIQRLRQEVEAAK 299
Query: 443 RTLSSSTQASIE--IDSLFEG 499
L+ + + +I+ + SL EG
Sbjct: 300 INLTRTNEVTIKLMLPSLSEG 320
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 514 SITRARFEELNADLFRSTMEPVEKSL 591
+I+R FE +N DLF+ ++P+ + L
Sbjct: 329 TISRKMFETINEDLFKKVLQPIRRVL 354
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 84.2 bits (199), Expect = 7e-17
Identities = 53/95 (55%), Positives = 62/95 (65%), Gaps = 26/95 (27%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN----------------- 134
++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 25 QLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRR 84
Query: 135 -------VLRIINEPTAAAIAYGLDKK--GTGERN 212
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 85 RPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 83.0 bits (196), Expect = 2e-16
Identities = 42/93 (45%), Positives = 59/93 (63%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+ + AL+RLR A E+AK
Sbjct: 19 IQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAK 78
Query: 443 RTLSSSTQASIEIDSLFEGIDFTRQLLVLASRS 541
LSSS Q I + + + L + SRS
Sbjct: 79 IELSSSVQTDINLPYITVDASGPKHLNMKLSRS 111
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 505 LHTSITRARFEELNADLFRSTMEPVEKSLR 594
L+ ++R++FE L ADL T+ P +K L+
Sbjct: 104 LNMKLSRSKFESLVADLINRTVGPCKKCLQ 133
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR-----KYKKDLATNKRALRRLRT 424
++ +G+++V +T D LGG +FD +++ +FKR K+K D TNKR+ +L+T
Sbjct: 172 SVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQT 231
Query: 425 ACERAKRTLSSSTQASIEIDSLFEGIDFTRQLLVLASR 538
+ E+ K LS+ A+ +DSL EGIDF Q+ ++ R
Sbjct: 232 SAEQCKNILSTLESANCSVDSLCEGIDFQGQVSRMSRR 269
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG
Sbjct: 182 TRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYG 241
Query: 183 LDKKG---TGERNVLIFXLGGGTFDV 251
+ K+ RNV+ +G + V
Sbjct: 242 IYKQDLPTDKPRNVVFVDIGHSSLQV 267
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 451
G +V STA + +LGG DFD +V HF QEFK KYK D+ ++ +A +L CE+ K+ +
Sbjct: 275 GQLKVLSTAVEPNLGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLM 334
Query: 452 SSST-QASIEIDSLFEGID 505
S++T + I I+ E D
Sbjct: 335 SANTSEIPINIECFMEDKD 353
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 505 LHTSITRARFEELNADLFRSTMEPVEKSL 591
+H + RA+FEEL ADL + P+ +L
Sbjct: 354 VHGRMKRAQFEELAADLLKLVEAPLRSAL 382
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Frame = +3
Query: 24 EAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK--- 194
E + +++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++
Sbjct: 98 EQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSF 157
Query: 195 -GTGERNVLIFXLGGGT 242
T E++ + + +G +
Sbjct: 158 NDTLEKHFMFYDMGASS 174
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Frame = +2
Query: 284 VKSTAGDTHLGGEDFDNRMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSS 457
+K D LGG D R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS+
Sbjct: 201 IKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSA 260
Query: 458 STQASIEIDSLFEGIDF 508
+ + +I+ +F+G DF
Sbjct: 261 NNEIFAQIEGVFDGKDF 277
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.70
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 441
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 340 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 429
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 441
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 291 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 407
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM 429
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 505 LHTSITRARFEELNADLFRSTMEPVEKSLR 594
L+ ++R++FE L ADL T+ P +K L+
Sbjct: 49 LNMKLSRSKFESLVADLINRTVGPCKKCLQ 78
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM 429
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Frame = +3
Query: 6 KMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 155
K T+E Y+G T + NA +T+P YF + +K G G+ + +++
Sbjct: 997 KDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSK 1054
Query: 156 PTAAAIAYGLDKKGTG 203
I+Y LD+K TG
Sbjct: 1055 ERNQEISYKLDRKWTG 1070
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 221 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 135
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 451
G ++ K T GD DF ++ HF + K ++D A +R A R + T+
Sbjct: 479 GQYKSKHTFGDLSCCLSDFGCQIDRHFFETSHAKGEQD-AAGANIKQRATLAVIRGRATI 537
Query: 452 SSSTQASIEIDSLF 493
S+ Q + S F
Sbjct: 538 KSAKQLHDYLSSKF 551
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 249 VSSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRT 386
VS+ S VSS N P+TP + ++T+ + +SR S G+ + +
Sbjct: 60 VSTSSSTPVSSPSNSTPSTPIRKSSSVTVTLNRRISRESCGSGRES 105
>SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +2
Query: 296 AGDTHLGGEDFD---NRMVNHFVQEF 364
AGD +GGEDFD +V+ F++ F
Sbjct: 19 AGDNDIGGEDFDVMSKSVVSRFIRHF 44
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 281 EVKSTAGDTHLGGEDFDNRMVNHFVQEFK 367
EVK T+GD + E DN + H ++ FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 450
LCP ++ + GP +++E AFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 349 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 450
LCP ++ + GP +++E AFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,519,135
Number of Sequences: 59808
Number of extensions: 408369
Number of successful extensions: 1292
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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