Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0540
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 154 5e-38
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 153 6e-38
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 153 1e-37
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 151 3e-37
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 151 3e-37
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 149 1e-36
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 149 1e-36
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 149 1e-36
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 147 4e-36
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 145 2e-35
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 126 1e-29
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 125 3e-29
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 111 3e-25
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 109 1e-24
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 80 1e-15
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 67 7e-12
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 67 1e-11
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 67 1e-11
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 59 3e-09
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 56 2e-08
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 56 2e-08
At3g63200.1 68416.m07100 patatin-related low similarity to patat... 30 1.0
At3g09000.1 68416.m01053 proline-rich family protein 29 2.3
At4g08560.1 68417.m01408 pumilio/Puf RNA-binding domain-containi... 27 7.1
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 27 7.1
At2g47070.1 68415.m05881 squamosa promoter-binding protein-like ... 27 9.4
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 154 bits (373), Expect = 5e-38
Identities = 76/87 (87%), Positives = 81/87 (93%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KMKE AEA+LG+TV+NAV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 129 KMKEVAEAFLGRTVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 188
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKKGT GE+NVLIF LGGGTFDVS L
Sbjct: 189 DKKGTKAGEKNVLIFDLGGGTFDVSLL 215
Score = 149 bits (360), Expect = 2e-36
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+G+FEVK+TAGDTHLGGEDFDNR+VNHFV EF+RK+KKD+A N RALRRLRTACERA
Sbjct: 216 TIEEGVFEVKATAGDTHLGGEDFDNRLVNHFVAEFRRKHKKDIAGNARALRRLRTACERA 275
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q +IEIDSL EGIDF
Sbjct: 276 KRTLSSTAQTTIEIDSLHEGIDF 298
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G + +I+RARFEE+N DLFR M+PVEK L+
Sbjct: 295 GIDFYATISRARFEEMNMDLFRKCMDPVEKVLK 327
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 153 bits (372), Expect = 6e-38
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+GIFEVK+TAGDTHLGGEDFDNRMVNHFVQEFKRK KKD+ N RALRRLRTACERA
Sbjct: 217 TIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERA 276
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q +IEIDSLFEGIDF
Sbjct: 277 KRTLSSTAQTTIEIDSLFEGIDF 299
Score = 144 bits (349), Expect = 4e-35
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KM+E AEA+LG V+NAV+TVPAYFNDSQRQATKDAG ISGLNV+RIINEPTAAAIAYGL
Sbjct: 130 KMREIAEAFLGSPVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGL 189
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKK + GE+NVLIF LGGGTFDVS L
Sbjct: 190 DKKASSVGEKNVLIFDLGGGTFDVSLL 216
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G +T+ITRARFEELN DLFR MEPVEK LR
Sbjct: 296 GIDFYTTITRARFEELNMDLFRKCMEPVEKCLR 328
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 153 bits (370), Expect = 1e-37
Identities = 71/83 (85%), Positives = 78/83 (93%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+GIFEVK+TAGDTHLGGEDFDNRMVNHFVQEFKRK KKD++ N RALRRLRTACERA
Sbjct: 217 TIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERA 276
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q +IEIDSLF+GIDF
Sbjct: 277 KRTLSSTAQTTIEIDSLFDGIDF 299
Score = 148 bits (358), Expect = 3e-36
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KM+E AEAYLG T++NAV+TVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct: 130 KMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 189
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKK T GE+NVLIF LGGGTFDVS L
Sbjct: 190 DKKATSVGEKNVLIFDLGGGTFDVSLL 216
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G + ITRARFEELN DLFR MEPVEK LR
Sbjct: 296 GIDFYAPITRARFEELNIDLFRKCMEPVEKCLR 328
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 151 bits (366), Expect = 3e-37
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+GIFEVK+TAGDTHLGGEDFDNRMVNHFVQEFKRK KKD+ N RALRRLRT+CERA
Sbjct: 217 TIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERA 276
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q +IEIDSL+EGIDF
Sbjct: 277 KRTLSSTAQTTIEIDSLYEGIDF 299
Score = 147 bits (357), Expect = 4e-36
Identities = 72/87 (82%), Positives = 79/87 (90%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KM+E AEAYLG T++NAV+TVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAAIAYGL
Sbjct: 130 KMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGL 189
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKK T GE+NVLIF LGGGTFDVS L
Sbjct: 190 DKKATSVGEKNVLIFDLGGGTFDVSLL 216
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G +++ITRARFEELN DLFR MEPVEK LR
Sbjct: 296 GIDFYSTITRARFEELNMDLFRKCMEPVEKCLR 328
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 151 bits (366), Expect = 3e-37
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+GIFEVK+TAGDTHLGGEDFDNRMVNHFVQEFKRK KKD++ + RALRRLRTACERA
Sbjct: 217 TIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGDARALRRLRTACERA 276
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q ++E+DSLFEGIDF
Sbjct: 277 KRTLSSTAQTTVEVDSLFEGIDF 299
Score = 144 bits (349), Expect = 4e-35
Identities = 71/87 (81%), Positives = 78/87 (89%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KM+E AEAYLG +++NAV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 130 KMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKK T G +NVLIF LGGGTFDVS L
Sbjct: 190 DKKATSVGIKNVLIFDLGGGTFDVSLL 216
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSLR 594
G ++ ITRA+FEE+N DLFR MEPV K LR
Sbjct: 296 GIDFYSPITRAKFEEMNMDLFRKCMEPVMKCLR 328
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 149 bits (362), Expect = 1e-36
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK +++AV+TVPAYFND+QRQATKDAG I+GLNV RIINEPTAAAIAYG
Sbjct: 157 TKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYG 216
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
LDKKG GE+N+L+F LGGGTFDVS L
Sbjct: 217 LDKKG-GEKNILVFDLGGGTFDVSVL 241
Score = 110 bits (264), Expect = 8e-25
Identities = 47/87 (54%), Positives = 69/87 (79%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TI++G+FEV ST GDTHLGGEDFD+R++ +F++ K+K++KD++ + +AL +LR CERA
Sbjct: 242 TIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECERA 301
Query: 440 KRTLSSSTQASIEIDSLFEGIDFTRQL 520
KR LSS Q +EI+SLF+G+D + L
Sbjct: 302 KRALSSQHQVRVEIESLFDGVDLSEPL 328
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSL 591
G L +TRARFEELN DLFR TM PV+K++
Sbjct: 321 GVDLSEPLTRARFEELNNDLFRKTMGPVKKAM 352
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 149 bits (362), Expect = 1e-36
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK +++AV+TVPAYFND+QRQATKDAG I+GLNV RIINEPTAAAIAYG
Sbjct: 157 TKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYG 216
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
LDKKG GE+N+L+F LGGGTFDVS L
Sbjct: 217 LDKKG-GEKNILVFDLGGGTFDVSVL 241
Score = 110 bits (264), Expect = 8e-25
Identities = 47/87 (54%), Positives = 69/87 (79%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TI++G+FEV ST GDTHLGGEDFD+R++ +F++ K+K++KD++ + +AL +LR CERA
Sbjct: 242 TIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECERA 301
Query: 440 KRTLSSSTQASIEIDSLFEGIDFTRQL 520
KR LSS Q +EI+SLF+G+D + L
Sbjct: 302 KRALSSQHQVRVEIESLFDGVDLSEPL 328
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 496 GY*LHTSITRARFEELNADLFRSTMEPVEKSL 591
G L +TRARFEELN DLFR TM PV+K++
Sbjct: 321 GVDLSEPLTRARFEELNNDLFRKTMGPVKKAM 352
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 149 bits (362), Expect = 1e-36
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK +++AV+TVPAYFND+QRQATKDAG I+GLNV RIINEPTAAAIAYG
Sbjct: 157 TKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYG 216
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
LDKKG GE+N+L+F LGGGTFDVS L
Sbjct: 217 LDKKG-GEKNILVFDLGGGTFDVSVL 241
Score = 112 bits (270), Expect = 1e-25
Identities = 48/87 (55%), Positives = 70/87 (80%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TI++G+FEV ST GDTHLGGEDFD+R++ +F++ K+K++KD++ + +AL +LR CERA
Sbjct: 242 TIDNGVFEVLSTNGDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRRECERA 301
Query: 440 KRTLSSSTQASIEIDSLFEGIDFTRQL 520
KR LSS Q +EI+SLF+G+DF+ L
Sbjct: 302 KRALSSQHQVRVEIESLFDGVDFSEPL 328
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 517 ITRARFEELNADLFRSTMEPVEKSL 591
+TRARFEELN DLFR TM PV+K++
Sbjct: 328 LTRARFEELNNDLFRKTMGPVKKAM 352
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 147 bits (357), Expect = 4e-36
Identities = 73/87 (83%), Positives = 79/87 (90%), Gaps = 2/87 (2%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
KM+E AEA+LG TV+NAV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGL
Sbjct: 130 KMREIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL 189
Query: 186 DKKGT--GERNVLIFXLGGGTFDVSSL 260
DKK T GE+NVLIF LGGGTFDVS L
Sbjct: 190 DKKATSVGEKNVLIFDLGGGTFDVSLL 216
Score = 143 bits (347), Expect = 7e-35
Identities = 67/83 (80%), Positives = 74/83 (89%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TIE+GIFEVK+TAGDTHLGGEDFDNRMVNHFVQEFKRK K+D+ RALRRLRTACERA
Sbjct: 217 TIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKQDITGQPRALRRLRTACERA 276
Query: 440 KRTLSSSTQASIEIDSLFEGIDF 508
KRTLSS+ Q +IEIDSL+ G DF
Sbjct: 277 KRTLSSTAQTTIEIDSLYGGADF 299
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 508 HTSITRARFEELNADLFRSTMEPVEKSLR 594
++ ITRARFEE+N DLFR MEPVEK LR
Sbjct: 300 YSPITRARFEEMNMDLFRKCMEPVEKCLR 328
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 145 bits (351), Expect = 2e-35
Identities = 69/86 (80%), Positives = 79/86 (91%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEA+LGK +++AVITVPAYFND+QRQATKDAG I+GLNV+RIINEPT AAIAYG
Sbjct: 171 TKMKETAEAFLGKKIKDAVITVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYG 230
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
LDKKG GE N+L++ LGGGTFDVS L
Sbjct: 231 LDKKG-GESNILVYDLGGGTFDVSIL 255
Score = 111 bits (267), Expect = 3e-25
Identities = 47/87 (54%), Positives = 71/87 (81%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
TI++G+FEV ST+GDTHLGGEDFD+R++++F++ K+KY KD++ + +AL +LR CE A
Sbjct: 256 TIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFIKLVKKKYNKDISKDHKALGKLRRECELA 315
Query: 440 KRTLSSSTQASIEIDSLFEGIDFTRQL 520
KR+LS+ Q +EI+SLF+G+DF+ L
Sbjct: 316 KRSLSNQHQVRVEIESLFDGVDFSEPL 342
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +1
Query: 517 ITRARFEELNADLFRSTMEPVEKSLR 594
+TRARFEELN DLF+ TMEPV+K+L+
Sbjct: 342 LTRARFEELNMDLFKKTMEPVKKALK 367
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 126 bits (304), Expect = 1e-29
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK++ AV+TVPAYFND+QRQATKDAG I+GL+V RIINEPTAAA++YG
Sbjct: 171 TKMKETAEAYLGKSINKAVVTVPAYFNDAQRQATKDAGKIAGLDVQRIINEPTAAALSYG 230
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
++ K E + +F LGGGTFDVS L
Sbjct: 231 MNNK---EGVIAVFDLGGGTFDVSIL 253
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
I G+FEVK+T GDT LGGEDFDN ++ + V EFKR DL + AL+RLR A E+AK
Sbjct: 255 ISSGVFEVKATNGDTFLGGEDFDNTLLEYLVNEFKRSDNIDLTKDNLALQRLREAAEKAK 314
Query: 443 RTLSSSTQASIEIDSLFEGIDFTRQLLVLASRS 541
LSS+TQ I + + + L + +RS
Sbjct: 315 IELSSTTQTEINLPFITADASGAKHLNITLTRS 347
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 125 bits (301), Expect = 3e-29
Identities = 62/86 (72%), Positives = 72/86 (83%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
TKMKETAEAYLGK+V AV+TVPAYFND+QRQATKDAG I+GL+V RIINEPTAAA++YG
Sbjct: 176 TKMKETAEAYLGKSVTKAVVTVPAYFNDAQRQATKDAGRIAGLDVERIINEPTAAALSYG 235
Query: 183 LDKKGTGERNVLIFXLGGGTFDVSSL 260
+ K E + +F LGGGTFDVS L
Sbjct: 236 MTNK---EGLIAVFDLGGGTFDVSVL 258
Score = 80.6 bits (190), Expect = 7e-16
Identities = 41/93 (44%), Positives = 58/93 (62%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
I +G+FEVK+T GDT LGGEDFDN +++ V EFK DLA ++ AL+RLR A E+AK
Sbjct: 260 ISNGVFEVKATNGDTFLGGEDFDNALLDFLVNEFKTTEGIDLAKDRLALQRLREAAEKAK 319
Query: 443 RTLSSSTQASIEIDSLFEGIDFTRQLLVLASRS 541
LSS++Q I + + + + +RS
Sbjct: 320 IELSSTSQTEINLPFITADASGAKHFNITLTRS 352
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 111 bits (267), Expect = 3e-25
Identities = 55/85 (64%), Positives = 64/85 (75%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
K+ + A +L V AVITVPAYFNDSQR ATKDAG I+GL VLRIINEPTAA++AYG
Sbjct: 198 KLVDDASRFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGF 257
Query: 186 DKKGTGERNVLIFXLGGGTFDVSSL 260
D+K +L+F LGGGTFDVS L
Sbjct: 258 DRK--ANETILVFDLGGGTFDVSVL 280
Score = 81.0 bits (191), Expect = 5e-16
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
+ DG+FEV ST+GDTHLGG+DFD R+V+ EFK+ DL +K+AL+RL A E+AK
Sbjct: 282 VGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAAEFKKDEGIDLLKDKQALQRLTEAAEKAK 341
Query: 443 RTLSSSTQASIEIDSLFEGIDFTRQLLVLASRS-*TPICSGL 565
LSS TQ ++ + + D + + +R+ +CS L
Sbjct: 342 IELSSLTQTNMSLPFITATADGPKHIETTLTRAKFEELCSDL 383
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 505 LHTSITRARFEELNADLFRSTMEPVEKSLR 594
+ T++TRA+FEEL +DL PVE SLR
Sbjct: 367 IETTLTRAKFEELCSDLLDRVRTPVENSLR 396
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 109 bits (263), Expect = 1e-24
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
K+ + A +L V AVITVPAYFNDSQR ATKDAG I+GL VLRIINEPTAA++AYG
Sbjct: 198 KLVDDASRFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGF 257
Query: 186 DKKGTGERNVLIFXLGGGTFDVSSL 260
++K +L+F LGGGTFDVS L
Sbjct: 258 ERK--SNETILVFDLGGGTFDVSVL 280
Score = 78.6 bits (185), Expect = 3e-15
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +2
Query: 263 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAK 442
+ DG+FEV ST+GDTHLGG+DFD R+V+ FK+ DL +K+AL+RL A E+AK
Sbjct: 282 VGDGVFEVLSTSGDTHLGGDDFDKRVVDWLASTFKKDEGIDLLKDKQALQRLTEAAEKAK 341
Query: 443 RTLSSSTQASIEIDSLFEGIDFTRQLLVLASR-S*TPICSGL 565
LSS TQ ++ + + D + + +R +CS L
Sbjct: 342 IELSSLTQTNMSLPFITATADGPKHIETTLTRGKFEELCSDL 383
Score = 33.9 bits (74), Expect = 0.082
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +1
Query: 505 LHTSITRARFEELNADLFRSTMEPVEKSLR 594
+ T++TR +FEEL +DL PVE SLR
Sbjct: 367 IETTLTRGKFEELCSDLLDRVRTPVENSLR 396
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERA 439
+ E G V+S A D +LGG DFD + NHF EFK KY D+ TN +A RLR +CE+
Sbjct: 213 SFESGSMRVRSHAFDRNLGGRDFDEVLFNHFALEFKEKYNIDVYTNTKACVRLRASCEKV 272
Query: 440 KRTLSSSTQASIEIDSLFEGID 505
K+ LS++ +A + I+ L E D
Sbjct: 273 KKVLSANAEAQLNIECLMEEKD 294
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +3
Query: 9 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 188
+K+ AE L V + VI +P+YF +SQR A DA I+GL LR++++ TA A+ YG+
Sbjct: 125 LKQIAEKSLKTPVSDCVIGIPSYFTNSQRLAYLDAAAIAGLRPLRLMHDSTATALGYGIY 184
Query: 189 K 191
K
Sbjct: 185 K 185
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 67.3 bits (157), Expect = 7e-12
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 272 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 451
G ++ S A D LGG DFD + NHF +FK +YK D++ N +A RLR CE+ K+ L
Sbjct: 216 GQLKILSHAFDRSLGGRDFDEVLFNHFAAKFKDEYKIDVSQNAKASLRLRATCEKLKKVL 275
Query: 452 SSSTQASIEIDSLFEGID 505
S++ A + I+ L + D
Sbjct: 276 SANPLAPLNIECLMDEKD 293
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
+ +K AE L V + I +P YF D QR+A DA TI+GL+ LR+I+E TA A+AYG
Sbjct: 123 SNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHETTATALAYG 182
Query: 183 L---DKKGTGERNVLIFXLGGGTFDV 251
+ D + + NV +G + V
Sbjct: 183 IYKTDLPESDQLNVAFIDIGHASMQV 208
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 272 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 451
G ++ S A D LGG DFD + NHF +FK +YK D++ N +A RLR CE+ K+ L
Sbjct: 216 GQLKILSHAFDRSLGGRDFDEVLFNHFAAKFKDEYKIDVSQNAKASLRLRATCEKLKKVL 275
Query: 452 SSSTQASIEIDSL 490
S++ A + I+ L
Sbjct: 276 SANPMAPLNIECL 288
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
+ +K AE L V + I +P YF D QR+A DA TI+GL+ L +I+E TA A+AYG
Sbjct: 123 SNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYG 182
Query: 183 LDKKGTGER---NVLIFXLGGGTFDV 251
+ K E NV +G + V
Sbjct: 183 IYKTDLPENDQLNVAFIDIGHASMQV 208
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +2
Query: 272 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 451
G ++ S A D LGG DFD + NHF +FK +YK D++ N +A RLR CE+ K+ L
Sbjct: 216 GQLKILSHAFDRSLGGRDFDEVLFNHFAAKFKDEYKIDVSQNAKASLRLRATCEKLKKVL 275
Query: 452 SSSTQASIEIDSL 490
S++ A + I+ L
Sbjct: 276 SANPMAPLNIECL 288
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 182
+ +K AE L V + I +P YF D QR+A DA TI+GL+ L +I+E TA A+AYG
Sbjct: 123 SNLKGIAEKNLNTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYG 182
Query: 183 LDKKGTGER---NVLIFXLGGGTFDV 251
+ K E NV +G + V
Sbjct: 183 IYKTDLPENDQLNVAFIDIGHASMQV 208
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 21 AEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-G 197
AE + V++ V++VP YF ++R+ A ++G+NVL ++NE + AA+ YG+DK
Sbjct: 154 AEFHAKIPVKDMVVSVPPYFGQAERRGLIQASQLAGVNVLSLVNEHSGAALQYGIDKDFA 213
Query: 198 TGERNVLIFXLGGGT 242
G R+V+ + +G +
Sbjct: 214 NGSRHVIFYDMGSSS 228
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNK--RALRRLRTACE 433
T+ F+VK D LGG+ + R+V HF EF ++ + K +A+ +L+ +
Sbjct: 247 TVSVNQFQVKDVRWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVK 306
Query: 434 RAKRTLSSSTQASIEIDSLFEGIDF 508
R K LS++T A I ++SL + DF
Sbjct: 307 RTKEILSANTAAPISVESLHDDRDF 331
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 511 TSITRARFEELNADLFRSTMEPVEKSLR 594
++ITR +FEEL DL+ ++ P++ L+
Sbjct: 333 STITREKFEELCKDLWERSLTPLKDVLK 360
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
+++ AEA L + V+N V+TVP F+ Q + A ++GL+VLR++ EPTA A+ Y
Sbjct: 153 ELRLMAEAQLKRPVRNVVLTVPVSFSRFQLTRFERACAMAGLHVLRLMPEPTAIALLYAQ 212
Query: 186 -------DKKGTG-ERNVLIFXLGGGTFDVS 254
D G+G ER +IF +G G DV+
Sbjct: 213 QQQMTTHDNMGSGSERLAVIFNMGAGYCDVA 243
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +3
Query: 6 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
+++ AEA L + V+N V+TVP F+ Q + A ++GL+VLR++ EPTA A+ Y
Sbjct: 153 ELRLMAEAQLKRPVRNVVLTVPVSFSRFQLTRFERACAMAGLHVLRLMPEPTAIALLYAQ 212
Query: 186 -------DKKGTG-ERNVLIFXLGGGTFDVS 254
D G+G ER +IF +G G DV+
Sbjct: 213 QQQMTTHDNMGSGSERLAVIFNMGAGYCDVA 243
>At3g63200.1 68416.m07100 patatin-related low similarity to
patatin-like latex protein allergen Hev b 7 - Hevea
brasiliensis, EMBL:AF113546; contains patatin domain
PF01734
Length = 384
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +3
Query: 45 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG-----TGER 209
V A P+ F + + S ++ ++N PTAAA+ + L K G
Sbjct: 192 VCRATSATPSLFKPFSVVSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVD 251
Query: 210 NVLIFXLGGGTFDVSSLPSR 269
++L+ LG G +SS P R
Sbjct: 252 DLLVLSLGNGPSTMSSSPGR 271
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 261 PSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPT 398
PS SSR PATPT R+ T ST+ ++R + R+S PT
Sbjct: 147 PSSSGSSRSTSRPATPT--RRSTTPTTSTSRPVTTRASNSRSSTPT 190
>At4g08560.1 68417.m01408 pumilio/Puf RNA-binding domain-containing
protein low similarity to RNA binding protein PufA
[Dictyostelium discoideum] GI:5106561; contains Pfam
profile PF00806: Pumilio-family RNA binding repeat
Length = 477
Score = 27.5 bits (58), Expect = 7.1
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 496 LKERIYLNARLCGR*QGPLCPLTCSTQTPKSSLVGSEVLFVFPLELLDKVVDHAIVKVLT 317
+KE I + RLCG G T TPKS LV + V+ + L L D V A+ K L
Sbjct: 332 IKEIISIAVRLCGNCYG--------TLTPKSLLVRNYVV-QYLLRLKDYEVTSALSKHLD 382
Query: 316 S---QVGVAGGGFHLEDTILDGKEDTSK 242
Q+ G H+ L+ +E +S+
Sbjct: 383 GNYVQLSYDKYGSHVVQKCLESREFSSR 410
>At3g57300.1 68416.m06378 transcriptional activator, putative
similar to transcriptional activator SRCAP [Homo
sapiens] GI:5106572; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 1507
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +3
Query: 255 SLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTRELLGVCVLHVR 434
SL +RM + +P +TP + ++ A ++ + S G+T RT L +L V + +
Sbjct: 256 SLQARMKAL--SPSNSTPNFSLKVSEAAMNSAIPEGSAGSTARTILSEGGVLQVHYVKIL 313
Query: 435 GQRGPCHRPHKRAL 476
++G + KR+L
Sbjct: 314 -EKGDTYEIVKRSL 326
>At2g47070.1 68415.m05881 squamosa promoter-binding protein-like 1
(SPL1) identical to squamosa promoter binding
protein-like 1 [Arabidopsis thaliana] GI:5931655;
contains Pfam profile PF03110: SBP domain
Length = 881
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/60 (20%), Positives = 27/60 (45%)
Frame = +3
Query: 42 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 221
T + V+ +P F+D +++ K S L + +I + + YG ++ R ++
Sbjct: 783 TEDHVVVNIPVSFSDREQKEPKSGPMASALEITQIPCKLCDHKLVYGTTRRSVAYRPAML 842
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,682,502
Number of Sequences: 28952
Number of extensions: 286224
Number of successful extensions: 895
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -