Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0539
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    31   0.008
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   6.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   8.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = -1

Query: 460 GFPQRLMLPLGTIGGLEMQMYVIVSPVRTGMLLPTLDMTMMKDRCACRWSSCI--STMPL 287
           G+PQ ++LP GT  G    ++V++S      +      T       C     +      +
Sbjct: 580 GWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSM 639

Query: 286 GYPFDR 269
           GYPFDR
Sbjct: 640 GYPFDR 645


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 326 TTVLHHGHVQCGQEHTGADRRHD 394
           T+  HH +   G  HTG    HD
Sbjct: 39  TSYQHHFNSPAGNAHTGPTGTHD 61


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 568 RIYPRVPFDSSCNGKRNDAFGDGQTMVKD 482
           R+YP VPF S  +G        G T+ KD
Sbjct: 357 RLYPSVPFISRVSGSEIQT-KTGYTIPKD 384


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 568 RIYPRVPFDSSCNGKRNDAFGDGQTMVKD 482
           R+YP VPF S  +G        G T+ KD
Sbjct: 357 RLYPSVPFISRVSGSEIQT-KTGYTIPKD 384


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 313 SSDKHNGPSSWSCPMWARAYRCGPA 387
           S  ++ G ++  CP    A R GPA
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPA 305


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 531 MESEMMPSEMARQWSRTGGASLATDSLRDL 442
           M  + +  E+A+ W +T    L T+ ++DL
Sbjct: 11  MMGKPIHEEVAQVWEQTLQKGLDTEEIKDL 40


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 170 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXSHDIV 45
           D  + V  K    YL    L K+T++D+          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKKTFRDLVAMFSDRIFINDIV 402


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -3

Query: 170 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXSHDIV 45
           D  + V  K    YL    L KRT++++          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKRTFRELVAMFSDRIFINDIV 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,930
Number of Sequences: 336
Number of extensions: 3379
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)