Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0537
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 152 2e-37
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 152 2e-37
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 151 4e-37
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 150 1e-36
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 9e-34
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 124 6e-29
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 83 3e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 83 3e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 82 4e-16
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 80 2e-15
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 73 2e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 1e-12
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 66 2e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 7e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 56 3e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.002
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 38 0.005
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.007
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.5
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.4
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 5.8
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 7.6
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 7.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 152 bits (369), Expect = 2e-37
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 125
Query: 435 SCDCLQGFQ 461
SCDCLQGFQ
Sbjct: 126 SCDCLQGFQ 134
Score = 140 bits (339), Expect = 9e-34
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 240
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 241 PRAILSTWSP 270
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 194
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 152 bits (369), Expect = 2e-37
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 279 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 338
Query: 435 SCDCLQGFQ 461
SCDCLQGFQ
Sbjct: 339 SCDCLQGFQ 347
Score = 144 bits (350), Expect = 4e-35
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +1
Query: 52 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 231
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 232 KYVPRAILSTWSP 270
KYVPRA+L P
Sbjct: 271 KYVPRAVLVDLEP 283
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 407
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 151 bits (367), Expect = 4e-37
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 70
Query: 435 SCDCLQGFQ 461
SCDC+QGFQ
Sbjct: 71 SCDCIQGFQ 79
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
LI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 96 LILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVE 139
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 150 bits (363), Expect = 1e-36
Identities = 65/69 (94%), Positives = 69/69 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 IDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAE 125
Query: 435 SCDCLQGFQ 461
SCDC+QGFQ
Sbjct: 126 SCDCIQGFQ 134
Score = 137 bits (331), Expect = 8e-33
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 240
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 241 PRAILSTWSP 270
PR++L P
Sbjct: 61 PRSVLIDLEP 70
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G LISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVE
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVE 194
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 140 bits (339), Expect = 9e-34
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 240
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 241 PRAILSTWSP 270
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVF 335
VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 124 bits (299), Expect = 6e-29
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+E
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAE 81
Query: 435 SCDCLQGFQ 461
+CDC+QG Q
Sbjct: 82 NCDCMQGVQ 90
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKV 583
G ++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 82.6 bits (195), Expect = 3e-16
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 561 QCTGLQGF 568
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 55 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 228
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 229 GKYVPRAILSTWSP 270
GK+VPRA+ P
Sbjct: 492 GKHVPRAVFVDLEP 505
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 234
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 235 YVPRAILSTWSP 270
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 586 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 629
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 713 QCTGLQGF 720
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 192 QCTGLQGF 199
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 234
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 235 YVPRAILSTWSP 270
+VPRA+ P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 52 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 225
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 226 GGKYVPRAILSTWSP 270
GK+VPRA+ P
Sbjct: 122 AGKHVPRAVFVDLEP 136
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 64 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 237
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 238 VPRAILSTWSP 270
VPRA+ P
Sbjct: 574 VPRAVFVDLEP 584
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 738 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 781
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 217 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 260
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 127 QCTGLQGF 134
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 64 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 237
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 238 VPRAILSTWSP 270
VPRA+ P
Sbjct: 61 VPRAVFVDLEP 71
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E
Sbjct: 152 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 195
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +3
Query: 258 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 437
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 438 CDCLQGF 458
C LQGF
Sbjct: 129 CTGLQGF 135
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 234
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 235 YVPRAILSTWSP 270
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLE 196
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 80.6 bits (190), Expect = 1e-15
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 546 QCSGLQGF 553
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +3
Query: 258 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 437
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 438 CDCLQGF 458
C LQGF
Sbjct: 114 CTGLQGF 120
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 55 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 228
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 229 GKYVPRAILSTWSPA 273
GK+VPRA+ P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 106 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILSTWSP 270
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 571 LLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLE 614
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 138 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 181
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +3
Query: 258 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 437
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 438 CDCLQGF 458
C LQGF
Sbjct: 933 CTGLQGF 939
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK ++
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 499 GCTGLQGF 506
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 55 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 228
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 229 GKYVPRAILSTWSP 270
GK+VPRA+ + P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 64 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 237
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 238 VPRAILSTWSP 270
VPRA+ P
Sbjct: 433 VPRAVFVDLEP 443
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 957 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 1000
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E
Sbjct: 524 LMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLE 567
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 234
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 235 YVPRAILSTWSP 270
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 196
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 93 QCTGLQGF 100
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E
Sbjct: 118 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLE 161
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 76.6 bits (180), Expect = 2e-14
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 434
VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK ++
Sbjct: 979 VDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTD 1038
Query: 435 SCDCLQGF 458
C LQGF
Sbjct: 1039 QCSGLQGF 1046
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 530 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
+Y + ++V P+P +S VVEPYN+ L+ H +E
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLE 1107
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G L+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVD 102
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +3
Query: 339 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 461
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 279 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 90 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 133
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 78 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 121
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G ++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLE 75
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 417 VRKESESCDCLQGFQ 461
+RKE+E CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 7e-11
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E
Sbjct: 78 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 121
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 425
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 234
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 235 YVPRAILSTWSPA 273
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +1
Query: 61 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 234
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 235 YVPRAILSTWSPAPWTLS 288
+VPRA+ P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +3
Query: 318 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
P+ + G+ A NN+A+GHYT G + VD VLD +RK ++ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E
Sbjct: 143 LMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLE 186
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 285 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 425
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 318 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 458
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 70 IVHLQAGQCGNQIGAKFWEIISDE 141
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 49 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 216
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 217 EASGGKY 237
E + GK+
Sbjct: 250 ETASGKH 256
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E
Sbjct: 284 LMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 327
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 118 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 219
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 255 VDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLD 413
VD E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 414 VVRKESESCDCLQG 455
+RKE E CD G
Sbjct: 103 AMRKEVERCDSFAG 116
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 509 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E
Sbjct: 28 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLE 71
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +2
Query: 500 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
G +++ + ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 207
Score = 35.1 bits (77), Expect = 0.050
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 255 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 362
+D+E G ++++ GP +F + SG GNNW
Sbjct: 80 IDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 521 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVE 640
+ ++YPD T +V PS D + PYN+ L++HQL E
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTE 59
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 479 WMXRVRYGHPLISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVEKH 646
W+ R +SKI EY + + + + V+P PK+ D + +P+ L V QL+E++
Sbjct: 13 WVCAFRSHVICVSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLEQN 70
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 373 CPLAQLLPAPDCPKTKLSGRKICP 302
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 512 ISKIREEYPDRIMNTYSVVPSPKVS 586
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 349 APDCPKTKLSGRKICPKGPERTESMVPGSKST 254
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 337 PKTKLSGRKICPKGPERTESMVPGSKSTGWRG 242
P T++ G+ IC K +R+ ++ GW G
Sbjct: 2178 PDTRVQGKPICGKQTQRSSCQKERQRARGWSG 2209
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 517 KDP*RVPRQNHEHILSSPLAQSIR 588
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 216 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 106
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 529 RVPRQNHEHILSSPLAQSIR 588
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 196 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 47
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,236,535
Number of Sequences: 59808
Number of extensions: 511998
Number of successful extensions: 1547
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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