Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0536
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 77 2e-14
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 48 9e-06
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32) 46 4e-05
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 44 8e-05
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 44 8e-05
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28) 42 3e-04
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 42 3e-04
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 42 4e-04
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 40 0.002
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08) 40 0.002
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 39 0.004
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 38 0.007
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24) 36 0.038
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08) 34 0.087
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031) 33 0.15
SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021) 33 0.20
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 32 0.35
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10) 30 1.9
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_22221| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTEW 146
PKR MSAYMLWLN R++IK +NPG+ VTE++K GE+WK++ DK++W
Sbjct: 542 PKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKW 589
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
KRPM+A+M+W R +I ENP + +EI+K+ G WK + D
Sbjct: 328 KRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 370
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
KRPM+A+M+W R +I ENP + +EI+K+ G WK + D
Sbjct: 11 KRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 53
>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
Length = 398
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
KRPM+A+M+W +AR ++ + P L E++K G++WK + D
Sbjct: 65 KRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWKLLND 107
>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 267
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+A+M+W + R Q+ +ENP L ++I+K G W+ +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 494
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+A+M+W + R Q+ +ENP L ++I+K G W+ +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
KRPM+A+M+W R ++ +NP + +EI+K+ G WK + ++
Sbjct: 790 KRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQ 833
>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
Length = 245
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
KRP++++M+W R + ENP +R EI+K G+ W+ M +
Sbjct: 11 KRPLNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKMPE 53
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
PK P++ Y+ +LN RE+++SENP L E+ + G +W +
Sbjct: 177 PKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQL 218
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
KRPM+A+M+W R ++ E+P + EI+K+ G+ WK + +
Sbjct: 46 KRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSE 88
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
KRPM+++M+W R + ENP L EI+K G+ W + K
Sbjct: 95 KRPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTK 138
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+ +M+W R QI ENPG+ ++K G WK +
Sbjct: 9 KRPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKL 49
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKS-ENPGLRVTEIAKKGGEIWKSMKDK 137
KRPM+A+M+W + R +IKS E P + +EI+K G WK+MKD+
Sbjct: 10 KRPMNAFMVW-SKERRRIKSQECPRMHNSEISKILGCEWKAMKDE 53
>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+AYM+W R +I E P + +EI+K+ G W S+
Sbjct: 9 KRPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSL 49
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEW 146
PKR +SAY ++N R+ +K +NP ++K GE+W M DKT++
Sbjct: 102 PKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQY 151
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
PK SAY +L RE+++ E + + +K E WK+M ++
Sbjct: 12 PKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEE 56
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/41 (34%), Positives = 28/41 (68%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+++M+W SAR ++ + P + E++K G++W+ +
Sbjct: 112 KRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRML 152
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
P +P+SAY ++ + I+ +NP + EIAK G++W+++ ++
Sbjct: 925 PPKPLSAYQIFFKETQAAIRLQNPSAQFGEIAKIVGQMWENLPEE 969
>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
Length = 324
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 134
P++P+ YM + +Q+K++NP ++ +I K G++W+ + D
Sbjct: 28 PEKPLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDD 71
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
KRPM+A+M+W R ++ NP L E++K G W+++
Sbjct: 367 KRPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRAL 407
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
KRP++A++LW R I +ENP + +I++K G W+ + ++
Sbjct: 20 KRPLNAFILWSKKRRRVIANENPQMHNFDISRKLGLEWQKLTEE 63
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTE 143
KRPM+A+M+W R I P EI+ + GEIW + + +
Sbjct: 102 KRPMNAFMIWARLHRSTIAKRYPQANNAEISIRLGEIWNDLSSEQQ 147
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 12 PMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
P+SA+ LW N AR+ + NP + ++ KK WK + +K
Sbjct: 230 PLSAFELWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEK 271
Score = 35.1 bits (77), Expect = 0.050
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
PK P+++Y + R ++ + P L+ TE+A K + W+ M ++
Sbjct: 152 PKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEE 196
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 3 PKRPMSAYMLW---LNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
PK P++ Y+ + LNS RE +K ++P L EI K G+ W S+
Sbjct: 194 PKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSL 238
>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
Length = 201
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 137
KRPM+A+M+W + R ++ + P + EI+K G W + ++
Sbjct: 10 KRPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEE 53
>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
Length = 271
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
K PM+A+M+ R+ S NPG+ +E +K G WK +
Sbjct: 10 KSPMNAFMVCSRGKRKHYASINPGMHNSEFSKSLGPEWKML 50
>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
Length = 406
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 18 SAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMK--DKTEW 146
+ + LWL R+QI+ ENP + ++ K + WK + +K W
Sbjct: 334 NGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVW 378
>SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)
Length = 200
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 18 SAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
+ + LWL R+QI+ ENP + ++ K + WK +
Sbjct: 41 NGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGL 77
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQI--KSENPGLRVTEIAKKGGEIWKSMKDK 137
PKRP +AY L+L + R+++ K+ G ++ +A GE W+ M D+
Sbjct: 577 PKRPPTAYFLFLAAFRKEMAGKALEDGKKIPSLA---GERWREMSDE 620
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSEN-----PGLRVTEIAKKGGEIWKSMKDK 137
KR SAY+ + + R ++K+++ P + E+AK GE WK + D+
Sbjct: 497 KRASSAYIHFTSDFRAKLKAKSAKSGTPLPKANEVAKLAGEEWKKLNDE 545
>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMK 131
KRP A+ + +++K ENP L+ EI K + W +++
Sbjct: 307 KRPTPAFFRFRQDYADKVKEENPHLKDAEIRKHLSDQWANLE 348
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +3
Query: 3 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 128
P++P + L++ +IK+EN G+ +I ++ G W+++
Sbjct: 374 PRKPPRHFSLFMRENFAKIKAENQGMSNPDIMRELGAKWRNL 415
>SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)
Length = 145
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKS 125
KR S Y+L+ + R I+ E+P EI++ GE W++
Sbjct: 36 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 75
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 6 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKS 125
KR S Y+L+ + R I+ E+P EI++ GE W++
Sbjct: 1269 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 1308
>SB_22221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 598 IITNTTISRKLKEYESRKNYLMAFYKQNTSAVKDDSNSH*MLIKINVKCISYRLWKVSPV 419
I+ + + ++ Y + L F K + + D + +KI KCI+ RL KV P
Sbjct: 10 IMQGSIVRAWVQWYREGREKLKIFSKLRKNCKEKDCDQKTKDVKIGSKCIAKRLEKVLPF 69
Query: 418 L 416
L
Sbjct: 70 L 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,629,280
Number of Sequences: 59808
Number of extensions: 237701
Number of successful extensions: 554
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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