Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0533
         (641 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37289| Best HMM Match : Herpes_teg_N (HMM E-Value=0.07)             32   0.34 
SB_27024| Best HMM Match : Pkinase (HMM E-Value=4.7e-25)               30   1.8  
SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                30   1.8  
SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.2  
SB_35326| Best HMM Match : IPK (HMM E-Value=0)                         29   3.2  
SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)              29   3.2  
SB_4209| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.2  
SB_28746| Best HMM Match : UPF0193 (HMM E-Value=0.31)                  29   4.2  
SB_16309| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_9048| Best HMM Match : UPF0193 (HMM E-Value=0.38)                   29   4.2  
SB_7244| Best HMM Match : YL1 (HMM E-Value=0.57)                       29   4.2  
SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.6  
SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)                  28   5.6  
SB_51109| Best HMM Match : ATP-cone (HMM E-Value=0.76)                 28   5.6  
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)                     28   7.4  
SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19)              28   7.4  
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)                  28   7.4  
SB_25457| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-08)         28   7.4  
SB_22757| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_38738| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.8  

>SB_37289| Best HMM Match : Herpes_teg_N (HMM E-Value=0.07)
          Length = 1248

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
 Frame = +3

Query: 312  DSTMVVKRAADSADSPILEEAGESGSEQ-KPKPLVKYGELVILGYNGYL--PAG--ERGR 476
            +S    ++   S   P+  +  E+   + K KP V+ G+++I+  +  +  P+G  E GR
Sbjct: 891  ESEKAKRKETLSVGKPVASKRQETAPHRLKKKPCVESGDVLIISTHKSIAPPSGINESGR 950

Query: 477  RRSQFVLYRRPKQM 518
            R ++ VL +RPK++
Sbjct: 951  RVNEAVLSKRPKKV 964


>SB_27024| Best HMM Match : Pkinase (HMM E-Value=4.7e-25)
          Length = 1595

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +2

Query: 314 FYHGRKTCCGQCGLTDTGGGRREWLGTEAKT----SRQIWRTRDTRVQWI 451
           FY   ++C G   L     G R WLGTE +T     ++ WR   T   +I
Sbjct: 732 FYRQEESCPGHRVLCMARVGTRTWLGTEGQTIEVFGKRSWRLPSTLCSFI 781


>SB_33401| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 4277

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 371 GRREW--LGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKAQANGVRRS 532
           GRR W  +GTE K+       R+ R +   T RR + +  P+R       NGV  S
Sbjct: 438 GRRRWHGIGTEVKSRGHQMSFREVRCRLPITIRRRKLRGLPLRFKIGTSNNGVLTS 493


>SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 385 PLSPASSSIGES-ALSAARFTTMVESVGSFVDPMIRTMLYKLHQYIKN 245
           P S +  S+  + A   AR  T+  S+G  +  ++R+    +HQYI N
Sbjct: 28  PFSKSKLSVTRARAYKVARCRTIQPSIGEALSSIVRSSHLPIHQYITN 75


>SB_35326| Best HMM Match : IPK (HMM E-Value=0)
          Length = 598

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +3

Query: 294 STNEPTDSTMVVKRAADSADSPILEEA-GESGSEQKPKPLVKYGELVILGYNGYLPAGER 470
           +  + T    V   A+++AD    +E  G+   +    P V  G+ VI  Y G L  G+ 
Sbjct: 210 TNKQETQEETVSSEASEAADESEFDECYGKECEKHASPPTVDEGDFVICRYEGELFPGQV 269

Query: 471 GRRRSQFVLY 500
            +   Q V+Y
Sbjct: 270 TKVYPQGVVY 279


>SB_32123| Best HMM Match : Keratin_B2 (HMM E-Value=0.019)
          Length = 1097

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = -1

Query: 314  IRRLVCRPYDSNYALQTSPIHKKHH*FYYITTNSILLKHTSLNICKLT 171
            ++ L CRP  +N  +QTS ++K+ H    I T+S    HT L I  L+
Sbjct: 865  MQTLSCRPRHTNVVIQTS-LYKRCHTGLVIQTSSCRPCHTDLVIQTLS 911


>SB_4209| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 210

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 316 ESVGSFVDPMIRTMLYKLHQYIKNTINFI 230
           E + SFVD +++ +  K   Y+K+T +FI
Sbjct: 43  ERISSFVDSLLQPIAQKQKSYLKDTTHFI 71


>SB_28746| Best HMM Match : UPF0193 (HMM E-Value=0.31)
          Length = 927

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 316 ESVGSFVDPMIRTMLYKLHQYIKNTINFI 230
           E + SFVD +++ +  K   Y+K+T +FI
Sbjct: 554 ERISSFVDSLLQPIAQKQKSYLKDTTHFI 582


>SB_16309| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 350

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 316 ESVGSFVDPMIRTMLYKLHQYIKNTINFI 230
           E + SFVD +++ +  K   Y+K+T +FI
Sbjct: 85  ERISSFVDSLLQPIAQKQKSYLKDTTHFI 113


>SB_9048| Best HMM Match : UPF0193 (HMM E-Value=0.38)
          Length = 663

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 316 ESVGSFVDPMIRTMLYKLHQYIKNTINFI 230
           E + SFVD +++ +  K   Y+K+T +FI
Sbjct: 422 ERISSFVDSLLQPIAQKQKSYLKDTTHFI 450


>SB_7244| Best HMM Match : YL1 (HMM E-Value=0.57)
          Length = 412

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 329 KTCCGQCGLTDTGGGRREWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKA 508
           K C     + D  G R+E L    KT ++    ++  + WI+++    T+ +P  SV + 
Sbjct: 59  KACDVYWEVLDKPGKRKEALKNYQKTYKEFIVFKEKILNWITSAEERETEIQPSDSVSRV 118

Query: 509 QANGVRRS 532
                R S
Sbjct: 119 SRRSRRSS 126


>SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 638

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 329 KTCCGQCGLTDTGGGRREWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKA 508
           K C     + D  G R+E L    KT+++     +  + WI+++    T+ +P  SV + 
Sbjct: 358 KACDVYWEVLDEPGERKEALKYYQKTNKEFIVFEEKILNWIASAEERETEIQPSDSVSRV 417

Query: 509 QANGVRRS 532
                R S
Sbjct: 418 SRRSRRSS 425


>SB_46556| Best HMM Match : CDtoxinA (HMM E-Value=1.1)
          Length = 208

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 8/24 (33%), Positives = 19/24 (79%)
 Frame = -3

Query: 129 TVHCHQCFFYFTITIKECVSYFAI 58
           ++  H+C  +++IT+ ECV++++I
Sbjct: 103 SITLHECVTFWSITLHECVTFWSI 126


>SB_51109| Best HMM Match : ATP-cone (HMM E-Value=0.76)
          Length = 250

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 329 KTCCGQCGLTDTGGGRREWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKA 508
           K C     + D  G R+E L    KT+++     +  + WI+++    T+ +P  SV + 
Sbjct: 64  KACDVYWEVLDEPGERKEALKYYQKTNKEFIVFEEKILNWIASAEERETEIQPSDSVSRV 123

Query: 509 QANGVRRS 532
                R S
Sbjct: 124 SRRSRRSS 131


>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
          Length = 1312

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -1

Query: 416  FDERFWLLFRATLSCLLQYR*VRTVRSTFYDHGRIRRLVCRPYDSNYALQTSPIHKKH 243
            + E+  LL +  L+  LQ R  R  R      GR+  L  R  +S+Y+LQTSP  + H
Sbjct: 1024 YQEQLNLLEQRNLT--LQARNERLEREVKMLSGRVVSLEERGLNSSYSLQTSPRGRPH 1079


>SB_56638| Best HMM Match : DAGK_cat (HMM E-Value=7.8e-19)
          Length = 836

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = -2

Query: 505 LLYRTNWLLLRPRSPAGRYPLYPSITSSPYLTRGFGFCSEPLSPASSSIGE-SALSAARF 329
           +L   + L   PR P    PL      S  L  G G+  EPLS   + + E S +   R+
Sbjct: 193 ILSELDKLKFNPRPPVAILPLGTGNDLSRALNWGGGYADEPLSKILTHVDEGSVVQLDRY 252

Query: 328 TTMVESVGSFVDPMI 284
                SV    D M+
Sbjct: 253 GNGTCSVDGDSDDMV 267


>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
          Length = 1080

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 389 GTEAKTSRQIWRTRDTRVQWISTSRRAR-TKKKPIRSVQKAQANGVRRSKHYVVKTPHSS 565
           G+E K      R RD+  + ++++RRAR +  KP+ S ++ +A+  ++ +     +P+S+
Sbjct: 225 GSEKKLLGSARRARDSTTKPLTSTRRARDSTTKPLTSTRRTRAS--KKHESAPKSSPNST 282

Query: 566 XAYSMPANTPSRTPSVAVRR 625
              + P         V V R
Sbjct: 283 EHEASPRCVRDSMEHVVVPR 302


>SB_25457| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-08)
          Length = 369

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 329 KTCCGQCGLTDTGGGRREWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKA 508
           K C     + D  G R+E L    KT+++     +  + WI+++    T+ +P  SV + 
Sbjct: 185 KACDVYWEVLDEPGERKEALKYYQKTNKEFIVFEEKILNWIASAEERETEIQPSDSVSQV 244

Query: 509 QANGVRRS 532
                R S
Sbjct: 245 SRRSRRSS 252


>SB_22757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1172

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 329 KTCCGQCGLTDTGGGRREWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKA 508
           K C     + D  G R+E L    KT+++     +  + WI+++    T+ +P  SV + 
Sbjct: 73  KACDVYWEVLDEPGERKEALKYYQKTNKEFIVFEEKILNWIASAEERETEIQPSDSVSQV 132

Query: 509 QANGVRRS 532
                R S
Sbjct: 133 SRRSRRSS 140


>SB_38738| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 210

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 478 LRPRSPAGRYPLYPSITSSPYLTRGFGFCSEPL-SPASSS 362
           ++ + PA +   Y  + S P+LT   G C  PL SP  SS
Sbjct: 129 MQKQLPASKRLCYTPLKSEPHLTPISGLCEIPLSSPTPSS 168


>SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 672

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 361 IGESALSAARFTTMVESVGSFVDPMIRTMLYKLHQYIKNTINFI 230
           IG   +S +  +T  E + SFV  +++ +  K   Y+K+T++FI
Sbjct: 359 IGRPIVSGSGGST--ERISSFVHSLLQPIAQKQKSYLKDTMHFI 400


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,918,607
Number of Sequences: 59808
Number of extensions: 425342
Number of successful extensions: 1287
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)