Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0533
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 32 0.40
Z78061-2|CAB01493.1| 474|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 30 1.6
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 30 1.6
AF022980-3|AAG24187.2| 396|Caenorhabditis elegans Serpentine re... 30 1.6
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 29 2.1
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 29 2.1
U97196-8|AAB52457.3| 191|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23524-3|AAC46823.2| 257|Caenorhabditis elegans Mirp k channel ... 29 3.7
U23524-2|ABD63241.1| 303|Caenorhabditis elegans Mirp k channel ... 29 3.7
AF541978-1|AAO65851.1| 256|Caenorhabditis elegans MPS-1 protein. 29 3.7
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 28 4.9
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF002197-4|AAD34659.1| 393|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 8.6
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 8.6
U53147-1|AAA96112.1| 132|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical
protein C55A1.8 protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 249 KTPLILLYHHQFNFIKTHIAKYLQTHFFSFYNKRHPI-LNATVHCHQCFFYFT 94
+T +ILL FN + I + Q FS+ P+ L+A VH C+FYFT
Sbjct: 254 RTMIILLIPMTFNLFVS-IGELFQIGNFSYILFLRPLFLDARVHIVTCYFYFT 305
>Z78061-2|CAB01493.1| 474|Caenorhabditis elegans Hypothetical
protein C48G7.2 protein.
Length = 474
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 348 ADSPILEEAGESGSEQKPKPLVKYGELVILGYNGYLPAGERGRRR--SQFVLYRRPKQMA 521
A SPI +E +S E++P+P + + P +RG S FVL R +
Sbjct: 229 ASSPIAQELSQSEVEERPRPPIPAMYINTSSSTTTAPTADRGEESVYSDFVLKRNSSTSS 288
Query: 522 *DVRSTTL*KLLI 560
+S TL + +I
Sbjct: 289 MSGKSVTLLEQII 301
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2
Query: 418 YLTRGF-GFCSEPLSPASSSIGESALSAARFT--TMVESVGSF 299
YL RGF GF + P S +S I ++ LS +FT +MV+ F
Sbjct: 300 YLKRGFIGFFTHPSSGTTSKIPKNRLSDPKFTQDSMVDDFSDF 342
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -2
Query: 418 YLTRGF-GFCSEPLSPASSSIGESALSAARFT--TMVESVGSF 299
YL RGF GF + P S +S I ++ LS +FT +MV+ F
Sbjct: 300 YLKRGFIGFFTHPSSGTTSKIPKNRLSDPKFTQDSMVDDFSDF 342
>AF022980-3|AAG24187.2| 396|Caenorhabditis elegans Serpentine
receptor, class w protein2 protein.
Length = 396
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = -3
Query: 225 HHQFNFIKTHIAKYLQTHFFSFYNKRHPILNATVHCHQCFFYFTITIKECVSYFAIFNKK 46
H F F T ++ + + P+ N++ H CFF T+ + +S I +K
Sbjct: 293 HFAFGFFTTSPLIKTASYLIMVFAEIFPVTNSSTHLFVCFFMSTLYRETAISMMGISKQK 352
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 345 SADSPILEEAGESGSEQKPKPLVKYGELVILGYN 446
SA +L E+G S SE +PK + + EL ILGYN
Sbjct: 365 SAYPRLLHESGVSKSETRPK-MRRSDELKILGYN 397
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 345 SADSPILEEAGESGSEQKPKPLVKYGELVILGYN 446
SA +L E+G S SE +PK + + EL ILGYN
Sbjct: 378 SAYPRLLHESGVSKSETRPK-MRRSDELKILGYN 410
>U97196-8|AAB52457.3| 191|Caenorhabditis elegans Hypothetical
protein B0207.2 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = -2
Query: 514 CLGLLYRTNWLLLRPRSPAGRYPLYPSITSSPYLTRGFGFCSEPLSPASSSIGESALSAA 335
C ++ TN+ LL YP++P TSSP +T G ++ A+ S+ S
Sbjct: 37 CANPMWYTNFCLLLHDYMQEMYPVHPDGTSSPKMT---GLRAQMQRHAAQSMATSE-DGT 92
Query: 334 RFTTMVESVGSFVDPMIRTMLYKLHQ 257
R T ES + M+ ++ +HQ
Sbjct: 93 RLTVRQESRATVA--MLAPAVHIMHQ 116
>U23524-3|AAC46823.2| 257|Caenorhabditis elegans Mirp k channel
accessory subunitprotein 1, isoform a protein.
Length = 257
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 377 REWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKAQANGVRRSKHYVVKT 553
RE L + + R++ R + W+ + + +K S K NG R HY + T
Sbjct: 87 REELEIQERKRRRLMRAKTQVTAWLVNKNKEKGPEKRKDSEWKPLPNGTRPRGHYSIST 145
>U23524-2|ABD63241.1| 303|Caenorhabditis elegans Mirp k channel
accessory subunitprotein 1, isoform b protein.
Length = 303
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 377 REWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKAQANGVRRSKHYVVKT 553
RE L + + R++ R + W+ + + +K S K NG R HY + T
Sbjct: 87 REELEIQERKRRRLMRAKTQVTAWLVNKNKEKGPEKRKDSEWKPLPNGTRPRGHYSIST 145
>AF541978-1|AAO65851.1| 256|Caenorhabditis elegans MPS-1 protein.
Length = 256
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 377 REWLGTEAKTSRQIWRTRDTRVQWISTSRRARTKKKPIRSVQKAQANGVRRSKHYVVKT 553
RE L + + R++ R + W+ + + +K S K NG R HY + T
Sbjct: 87 REELEIQERKRRRLMRAKTQVTAWLVNKNKEKGPEKRKDSEWKPLPNGTRPRGHYSIST 145
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -3
Query: 285 FELCFTNFTNT*KTPLILLYHHQFNFIKTHIAKYLQTHFFSFYNKRHPILNATVHCHQCF 106
FEL T F K PL+ L H ++ I T I + +N+ LN VH
Sbjct: 136 FELVDTIFLVLRKRPLMFL--HWYHHILTMIYAWYSHPLTPGFNRYGIYLNFVVHAFMYS 193
Query: 105 FYFTITIK 82
+YF ++K
Sbjct: 194 YYFLRSMK 201
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -3
Query: 285 FELCFTNFTNT*KTPLILLYHHQFNFIKTHIAKYLQTHFFSFYNKRHPILNATVHCHQCF 106
FEL T F K PL+ L H ++ I T I + +N+ LN VH
Sbjct: 136 FELVDTIFLVLRKRPLMFL--HWYHHILTMIYAWYSHPLTPGFNRYGIYLNFVVHAFMYS 193
Query: 105 FYFTITIK 82
+YF ++K
Sbjct: 194 YYFLRSMK 201
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 6.5
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Frame = +2
Query: 407 SRQIWRTRDTRVQWISTSRRARTKKKP--IRSVQKAQANGVRRSKHYVVKTPHSSXAYSM 580
+R R+R+ V S+ ++ + K P +S +KA + R V KTP S + S
Sbjct: 7 ARSTSRSRNA-VSAPSSEKKTKMSKSPSPAKSARKASKSPARARTSNVKKTPSRSASKSA 65
Query: 581 PAN--------TPSRTPSVAVRRS 628
TPS+TPS A RS
Sbjct: 66 TRGRTASKTPKTPSKTPSSASARS 89
>AF002197-4|AAD34659.1| 393|Caenorhabditis elegans Hypothetical
protein F20H11.6 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 436 SITSSPYLTRGFGFCSEPLSPASSSIGESALSAARFTTMVESVGSFVDPMIRTMLYKLHQ 257
S T SP++T S SPASS+ E + R + + GS V ++T Q
Sbjct: 238 SATVSPHITSSLTQRSHTSSPASSA-SEGTVVPPRKKGLPITTGSIVKRTVQTKDGLQTQ 296
Query: 256 YIKNTIN 236
Y+K +N
Sbjct: 297 YLKAFVN 303
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = -3
Query: 279 LCFTNFTNT*KT-PLILLYHHQFNFIKTHIAKYLQTHFFSFYNKRHPILNATVHCHQCFF 103
+CF T T PL +LY + F T + + S + K ++N T+H CFF
Sbjct: 228 VCFVTITFLISTVPLGILYFIEMIFFDTDGLESIIRKNSSIF-KLISLINGTIHFLICFF 286
Query: 102 YFTI---TIKE 79
T+ T+KE
Sbjct: 287 MSTLYRKTVKE 297
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 291 GSTNEPTDSTMVVKRAADSADSPILEEAGESGSEQKP 401
GS+ EP+ S+ ++DS+ S + + +SGS +P
Sbjct: 532 GSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 291 GSTNEPTDSTMVVKRAADSADSPILEEAGESGSEQKP 401
GS+ EP+ S+ ++DS+ S + + +SGS +P
Sbjct: 532 GSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 291 GSTNEPTDSTMVVKRAADSADSPILEEAGESGSEQKP 401
GS+ EP+ S+ ++DS+ S + + +SGS +P
Sbjct: 532 GSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 291 GSTNEPTDSTMVVKRAADSADSPILEEAGESGSEQKP 401
GS+ EP+ S+ ++DS+ S + + +SGS +P
Sbjct: 532 GSSTEPSGSSTEPSGSSDSSSSELPNSSTDSGSTSEP 568
>U53147-1|AAA96112.1| 132|Caenorhabditis elegans Hypothetical
protein C01B7.3 protein.
Length = 132
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 287 HRVYKRADGFYHGRKTCC 340
HR+ +RA F HG KTCC
Sbjct: 72 HRIIQRAH-FSHGTKTCC 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,960,450
Number of Sequences: 27780
Number of extensions: 319914
Number of successful extensions: 1054
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -