Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0524
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.9  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    24   5.9  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 125 IYRPRSSVARTDPTVSLSKKQSAMTTQSW 211
           +Y+  S+V RTD   ++ K++   T + W
Sbjct: 849 VYQRLSAVNRTDTRANIRKQERQATIEQW 877


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 625 GATMQNGDGSVSTHFELDGAHAP 557
           G T++ GD  +S H +  G+H P
Sbjct: 837 GGTLKPGDVLLSNHPQAGGSHLP 859


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +2

Query: 494 LEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVGRN 595
           ++AV+ E+Y  IHR +  +V  G+  +++  G+N
Sbjct: 202 IKAVIAESYERIHRSN--LVGMGIVPLQYLAGQN 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,173
Number of Sequences: 2352
Number of extensions: 14541
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)