Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0524
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 163 5e-40
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 163 5e-40
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 163 5e-40
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 163 5e-40
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 161 3e-39
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 145 2e-34
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 53 1e-06
BC067899-1|AAH67899.1| 330|Homo sapiens ZP1 protein protein. 31 4.5
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 163 bits (397), Expect = 5e-40
Identities = 85/147 (57%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+R+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+
Sbjct: 55 DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRI 114
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPF 611
H+LPIDD+VEG+TGNLFEVYLKPY R I + G K VETDPSP+
Sbjct: 115 HVLPIDDTVEGITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPY 173
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIVAPDTVIHC GE I ++ E+LN
Sbjct: 174 CIVAPDTVIHCEGEPIKREDEE-ESLN 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG 54
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 163 bits (397), Expect = 5e-40
Identities = 85/147 (57%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+R+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+
Sbjct: 55 DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRI 114
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPF 611
H+LPIDD+VEG+TGNLFEVYLKPY R I + G K VETDPSP+
Sbjct: 115 HVLPIDDTVEGITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPY 173
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIVAPDTVIHC GE I ++ E+LN
Sbjct: 174 CIVAPDTVIHCEGEPIKREDEE-ESLN 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG 54
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 163 bits (397), Expect = 5e-40
Identities = 85/147 (57%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+R+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+
Sbjct: 55 DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRI 114
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPF 611
H+LPIDD+VEG+TGNLFEVYLKPY R I + G K VETDPSP+
Sbjct: 115 HVLPIDDTVEGITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPY 173
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIVAPDTVIHC GE I ++ E+LN
Sbjct: 174 CIVAPDTVIHCEGEPIKREDEE-ESLN 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG 54
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 163 bits (397), Expect = 5e-40
Identities = 85/147 (57%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+R+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+
Sbjct: 55 DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRI 114
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPF 611
H+LPIDD+VEG+TGNLFEVYLKPY R I + G K VETDPSP+
Sbjct: 115 HVLPIDDTVEGITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPY 173
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIVAPDTVIHC GE I ++ E+LN
Sbjct: 174 CIVAPDTVIHCEGEPIKREDEE-ESLN 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG 54
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 161 bits (390), Expect = 3e-39
Identities = 84/147 (57%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+R+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+
Sbjct: 55 DTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRI 114
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPF 611
H+LPIDD+VEG+TGNLFEVYLKPY R I + G K VET PSP+
Sbjct: 115 HVLPIDDTVEGITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETHPSPY 173
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIVAPDTVIHC GE I ++ E+LN
Sbjct: 174 CIVAPDTVIHCEGEPIKREDEE-ESLN 199
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/51 (72%), Positives = 48/51 (94%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRG 54
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 145 bits (351), Expect = 2e-34
Identities = 76/137 (55%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = +3
Query: 285 KETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 464
+E VCIVLSDD DE IRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 465 GLTGNLFEVYLKPYLWRLTVRSIVTTPSWSA-GACAPSSSKWVETDPSPFCIVAPDTVIH 641
G+TGNLFEVYLKPY R I + G K VETDPSP+CIVAPDTVIH
Sbjct: 63 GITGNLFEVYLKPYFLE-AYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 121
Query: 642 CGGEXIXNVRKK*EALN 692
C GE I ++ E+LN
Sbjct: 122 CEGEPIKREDEE-ESLN 137
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 52.8 bits (121), Expect = 1e-06
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +3
Query: 582 KWVETDPSPFCIVAPDTVIHCGGEXIXNVRKK*EALN 692
K VETDPSP+CIVAPDTVIHC GE I ++ E+LN
Sbjct: 2 KVVETDPSPYCIVAPDTVIHCEGEPIKREDEE-ESLN 37
>BC067899-1|AAH67899.1| 330|Homo sapiens ZP1 protein protein.
Length = 330
Score = 31.1 bits (67), Expect = 4.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 637 ITVSGATMQ-NGDGSVSTHFELDGAHAPADHEGVVTMDRTVSLHKYGFKYTSNRLPVRPS 461
+T G TMQ GD + ++ + G H +G +T D T LH S+ LP++ S
Sbjct: 37 LTHCGTTMQVAGDQLIYENWLVSGIHIQKGPQGSITRDSTFQLHVRCVFNASDFLPIQAS 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,480,658
Number of Sequences: 237096
Number of extensions: 2025309
Number of successful extensions: 4176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4164
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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