Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0524
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 130 1e-30
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 4.8
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 8.3
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 8.3
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 133 bits (322), Expect = 1e-31
Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
D V+LKGK+RKE+V I++SD++ P+E +RM DVVSI P P++ YG R+
Sbjct: 61 DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI 120
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSAGACAPS-SSKWVETDPSPF 611
H+LPIDD++EGLTGNLF+V+LKPY R + ++ A + K VET+P+P
Sbjct: 121 HVLPIDDTIEGLTGNLFDVFLKPYFLE-AYRPLHKGDIFTVQAAMRTVEFKVVETEPAPA 179
Query: 612 CIVAPDTVIHCGGEXIXNVRKK*EALN 692
CIV+PDT+IH G+ I ++ E++N
Sbjct: 180 CIVSPDTMIHYEGDPIKREEEE-ESMN 205
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1
Query: 112 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
K D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRG
Sbjct: 13 KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRG 60
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 130 bits (313), Expect = 1e-30
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
D+V+LKGK+R+ETV IVL+ DN P++ I+M DVVSI+ ++YGKRV
Sbjct: 61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRV 119
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYL---WRLTVRSIVTTPSWSAGACAPSSSKWVETDPS 605
H+LPIDD++EGLTGNLF+V+L+PY +R + + T A K VETDP+
Sbjct: 120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQ---AAMRTVEFKVVETDPA 176
Query: 606 PFCIVAPDTVIHCGGEXIXNVRKK*EALN 692
P CIVAPDTVIH G+ I ++ EALN
Sbjct: 177 PACIVAPDTVIHYEGDPIKREEEE-EALN 204
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = +1
Query: 112 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRG
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 130 bits (313), Expect = 1e-30
Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNXPDEXIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
D+V+LKGK+R+ETV IVL+ DN P++ I+M DVVSI+ ++YGKRV
Sbjct: 61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRV 119
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYL---WRLTVRSIVTTPSWSAGACAPSSSKWVETDPS 605
H+LPIDD++EGLTGNLF+V+L+PY +R + + T A K VETDP+
Sbjct: 120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQ---AAMRTVEFKVVETDPA 176
Query: 606 PFCIVAPDTVIHCGGEXIXNVRKK*EALN 692
P CIVAPDTVIH G+ I ++ EALN
Sbjct: 177 PACIVAPDTVIHYEGDPIKREEEE-EALN 204
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/48 (62%), Positives = 41/48 (85%)
Frame = +1
Query: 112 KSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
K D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRG
Sbjct: 13 KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1
Query: 126 IIRAFIICHFIQNLLLESKNYYNFY 52
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 91 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 240
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 91 LNKMADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQL 240
L K+ NK+ +DL T LR++ +++ E V+ N AK+E +
Sbjct: 61 LRKLLMNKAAEDLKTQQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAI 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,506,162
Number of Sequences: 27780
Number of extensions: 319793
Number of successful extensions: 800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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