Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0523
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 122 5e-28
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 117 1e-26
08_02_0657 - 19749835-19751942,19753123-19753561 94 1e-19
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 32 0.67
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 31 1.2
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 31 1.2
09_06_0271 + 21959213-21960559 29 3.6
05_04_0011 + 17139322-17139451,17139552-17140174 29 3.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 6.3
03_02_0776 + 11103195-11103812 29 6.3
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 29 6.3
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 28 8.3
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 122 bits (293), Expect = 5e-28
Identities = 54/84 (64%), Positives = 64/84 (76%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+RK+T+CIVL+DD C + KIRM DVVS+ CP VKYGKRV
Sbjct: 62 DTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKRV 121
Query: 435 HILPIDDSVEGLTGNLFEVYLKPY 506
HILPIDD+VEG+TGNLF+ +LKPY
Sbjct: 122 HILPIDDTVEGITGNLFDAFLKPY 145
Score = 113 bits (271), Expect = 2e-25
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = +2
Query: 488 SILEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT* 667
+ L+ +EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIK
Sbjct: 140 AFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCIVAPDTEIFCDGEPIK-- 197
Query: 668 XRRGSTKCCRAMMTS-GGCRKQLAPNLREMVELPLRHPSLVQXYLELKLPTXAFLH 832
R + GG RKQ+A +RE+VELPLRHP L + + +K P L+
Sbjct: 198 -REDEERLDEVGYDDVGGVRKQMA-QIRELVELPLRHPQLFKS-IGVKPPKGILLY 250
Score = 64.9 bits (151), Expect = 8e-11
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
+D K D STAIL RK PNRL+V+EA +DDNSV+ + ME+LQLFRG
Sbjct: 11 SDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFRG 61
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 117 bits (281), Expect = 1e-26
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTVLLKGK+RK+T+CIVL+D+ C + KIRM DVVS+ C VKYGKRV
Sbjct: 62 DTVLLKGKKRKDTICIVLADETCEEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKRV 121
Query: 435 HILPIDDSVEGLTGNLFEVYLKPY 506
HILPIDD+VEG+TGNLF+ +LKPY
Sbjct: 122 HILPIDDTVEGITGNLFDAFLKPY 145
Score = 113 bits (272), Expect = 2e-25
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
Frame = +2
Query: 488 SILEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT* 667
+ L+ +EAYRP+ + D F+VRGGMR+VEFKV+ETDP+ +CIVAPDT I CDGEPIK
Sbjct: 140 AFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPTEYCIVAPDTEIFCDGEPIK-- 197
Query: 668 XRRGSTKCCRAMMTS-GGCRKQLAPNLREMVELPLRHPSLVQXYLELKLPTXAFLH 832
R + GG RKQ+A +RE+VELPLRHP L + + +K P L+
Sbjct: 198 -REDEERLDEVGYDDVGGVRKQMA-QIRELVELPLRHPQLFKS-IGVKPPKGILLY 250
Score = 68.5 bits (160), Expect = 6e-12
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = +1
Query: 103 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
AD K D STAIL RK PNRL+V+EA +DDNSVVAL ME+LQLFRG
Sbjct: 11 ADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRG 61
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 93.9 bits (223), Expect = 1e-19
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
D V L+G+RR+E VC D++CPD ++R+ D+V++ PCP+++ KRV
Sbjct: 65 DLVTLRGRRRREAVCYAQKDESCPDGRLRLSRGVRSNLHVRLGDLVTVKPCPTIRNAKRV 124
Query: 435 HILPIDDSVEGLTGNLFEVYLKPY 506
+ P DDSVEG++G+LFE YLKPY
Sbjct: 125 QLRPFDDSVEGISGDLFEPYLKPY 148
Score = 81.8 bits (193), Expect = 6e-16
Identities = 50/102 (49%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Frame = +2
Query: 494 LEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP-SPFCIVAPDTVIHCD-GEPIKT* 667
L+ M+A RP+ + D F+VRG M AVEFKV++T+P + IVA DT I CD G+P+K
Sbjct: 145 LKPYFMDALRPVKKGDRFLVRGHMHAVEFKVMDTEPNNEPVIVAGDTEIFCDEGDPVK-- 202
Query: 668 XRRGSTKCCRAMMTS-GGCRKQLAPNLREMVELPLRHPSLVQ 790
R + GG RKQLA +RE+VELPLRHP L Q
Sbjct: 203 -REDEERLDGPGYDDVGGVRKQLA-QIRELVELPLRHPKLFQ 242
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +1
Query: 124 DLSTAILR--RKDRPNRLIVEEA---VSDDNSVVALSQAKMEQLQLFRGTQSCSRANAAR 288
D STAIL +K PNRL+ ++A V+ DNS V LS+A ME+L +FRG R R
Sbjct: 16 DYSTAILECAKKKSPNRLMADDAEGGVAVDNSTVTLSEATMEELGIFRGDLVTLRGRRRR 75
Query: 289 K 291
+
Sbjct: 76 E 76
>03_05_0754 + 27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 439 YCQLMIQLRVLLAIYSKYT*-SRTYGGLPSDPS*RHLHGPRGHARRRVQSGRNRSITILH 615
+C+ IQ+ A + ++ S + L + S HLHG G RR + +GR R+I +L
Sbjct: 1228 FCEKKIQIPPESACFIEFPDESLPHETLQASSSAVHLHGHHGRLRRFLAAGRLRAIDVLG 1287
Query: 616 RG 621
G
Sbjct: 1288 HG 1289
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHP 778
GGC++Q+ +RE+VELP+ HP
Sbjct: 171 GGCKEQIE-KMREVVELPMLHP 191
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHP 778
GGC++Q+ +RE+VELP+ HP
Sbjct: 171 GGCKEQIE-KMREVVELPMLHP 191
>09_06_0271 + 21959213-21960559
Length = 448
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHPSL 784
GGC Q +RE VELPL HP L
Sbjct: 193 GGCEAQKR-EVREAVELPLTHPEL 215
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 806 LTPNTXEPVKDDAVAIPPSPLNLAPVVCDNRRMS-S*PDSI 687
LTP +P+ ++ PPSP N A V+ D +R++ + PD +
Sbjct: 193 LTPIGPDPIHNEFPPPPPSPPNGANVIGDGKRLTPTGPDPV 233
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 806 LTPNTXEPVKDDAVAIPPSPLNLAPVVCDNRRMS-S*PDSI 687
LTP +PV + PPSP N V+ D +R++ + PD I
Sbjct: 125 LTPTGPDPVHNKFQPPPPSPPNGGNVIGDGKRLTPTGPDPI 165
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 821 PPWEALTPNTXEPVKDDAVAIPPSPLNLAPVV 726
PP A TP P + + +PP P++ PVV
Sbjct: 36 PPNPATTPTPLTPNPNPSPTLPPPPMSTPPVV 67
>03_02_0776 + 11103195-11103812
Length = 205
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 674 RGSTKCCRAMMTSGGCRKQLA--PNLREMVELPLRHPS 781
RG T+ RA++ S R Q A LRE + P RHPS
Sbjct: 90 RGRTRWSRAILASHRRRIQAARRARLREAISPPSRHPS 127
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 94 NKMADNKSPDDLSTAILR-RKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGTQSCS 270
N A + DD S A ++D P ++ VE+ V D + + KM+ L L++ ++ +
Sbjct: 591 NHAAPQANKDDGSGANSAVQEDAPKKVEVEKQVLDSREKLEYYRTKMQDLVLYK-SRCDN 649
Query: 271 RANAARKPFASCSQTIIALMRKF 339
R N + +S + + +L +K+
Sbjct: 650 RLNEITERASSDKREVESLAKKY 672
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 502 RTYGGLPSDPS*RHLHGPRGHARRRVQSGRNRSITILHR 618
R GG+P + GPRG R V SG +R++ LH+
Sbjct: 210 RPRGGMPQP----YYGGPRGSGGRSVPSGSSRTVPELHQ 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,116,424
Number of Sequences: 37544
Number of extensions: 536121
Number of successful extensions: 1510
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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