BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0523
(858 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132553-1|AAD27852.1| 801|Drosophila melanogaster BcDNA.GM0288... 133 3e-31
AF047037-1|AAC27447.1| 801|Drosophila melanogaster transitional... 133 3e-31
AE013599-984|AAF58863.1| 801|Drosophila melanogaster CG2331-PA,... 133 3e-31
AF202034-1|AAF17568.1| 799|Drosophila melanogaster endoplasmic ... 133 3e-31
AE014298-1761|AAN09307.1| 618|Drosophila melanogaster CG32651-P... 31 2.0
AY061606-1|AAL29154.1| 433|Drosophila melanogaster SD07148p pro... 31 2.7
AF145307-1|AAF08388.1| 433|Drosophila melanogaster 26S proteaso... 31 2.7
AE013599-469|AAF59219.1| 433|Drosophila melanogaster CG1341-PA ... 31 2.7
BT016123-1|AAV37008.1| 591|Drosophila melanogaster LD01328p pro... 29 6.2
AY268068-1|AAQ56704.1| 591|Drosophila melanogaster UDP-GalNAc:p... 29 6.2
AF493067-1|AAM62412.1| 591|Drosophila melanogaster UDP-N-acetyl... 29 6.2
AE014298-2730|AAN09470.1| 591|Drosophila melanogaster CG6394-PB... 29 6.2
AE014298-2729|AAF48851.1| 591|Drosophila melanogaster CG6394-PA... 29 6.2
>AF132553-1|AAD27852.1| 801|Drosophila melanogaster BcDNA.GM02885
protein.
Length = 801
Score = 133 bits (322), Expect = 3e-31
Identities = 77/151 (50%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTV+LKGKRRKETVCIVLSDD CPDEKIRM SDVVS+ CP VKYGKRV
Sbjct: 52 DTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRV 111
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSAGACAPSSSKWSKQIHHHFA 614
ILPID+S EG+TGNLFE+YLKPY R I ++ A K +
Sbjct: 112 RILPIDESTEGVTGNLFEIYLKPYFLE-AYRPIHMGDNFIVRAAMRPIE--FKVVLTDPE 168
Query: 615 SWLLIP*YTVTV---NRLKRXXEEEALNAVG 698
+ ++ TV + +KR EEE+LNAVG
Sbjct: 169 PYCIVAPETVIFCDGDPIKREEEEESLNAVG 199
Score = 117 bits (282), Expect = 2e-26
Identities = 58/97 (59%), Positives = 67/97 (69%)
Frame = +2
Query: 494 LEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT*XR 673
L+ +EAYRPIH D F+VR MR +EFKVV TDP P+CIVAP+TVI CDG+PIK
Sbjct: 132 LKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEE 191
Query: 674 RGSTKCCRAMMTSGGCRKQLAPNLREMVELPLRHPSL 784
S GGCRKQLA ++EMVELPLRHPSL
Sbjct: 192 EESLNAV-GYDDIGGCRKQLA-QIKEMVELPLRHPSL 226
Score = 83.8 bits (198), Expect = 3e-16
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = +1
Query: 100 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
MAD+K +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRG
Sbjct: 1 MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRG 51
>AF047037-1|AAC27447.1| 801|Drosophila melanogaster transitional
endoplasmic reticulumATPase TER94 protein.
Length = 801
Score = 133 bits (322), Expect = 3e-31
Identities = 77/151 (50%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTV+LKGKRRKETVCIVLSDD CPDEKIRM SDVVS+ CP VKYGKRV
Sbjct: 52 DTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRV 111
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSAGACAPSSSKWSKQIHHHFA 614
ILPID+S EG+TGNLFE+YLKPY R I ++ A K +
Sbjct: 112 RILPIDESTEGVTGNLFEIYLKPYFLE-AYRPIHMGDNFIVRAAMRPIE--FKVVLTDPE 168
Query: 615 SWLLIP*YTVTV---NRLKRXXEEEALNAVG 698
+ ++ TV + +KR EEE+LNAVG
Sbjct: 169 PYCIVAPETVIFCDGDPIKREEEEESLNAVG 199
Score = 117 bits (282), Expect = 2e-26
Identities = 58/97 (59%), Positives = 67/97 (69%)
Frame = +2
Query: 494 LEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT*XR 673
L+ +EAYRPIH D F+VR MR +EFKVV TDP P+CIVAP+TVI CDG+PIK
Sbjct: 132 LKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEE 191
Query: 674 RGSTKCCRAMMTSGGCRKQLAPNLREMVELPLRHPSL 784
S GGCRKQLA ++EMVELPLRHPSL
Sbjct: 192 EESLNAV-GYDDIGGCRKQLA-QIKEMVELPLRHPSL 226
Score = 83.8 bits (198), Expect = 3e-16
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = +1
Query: 100 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
MAD+K +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRG
Sbjct: 1 MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRG 51
>AE013599-984|AAF58863.1| 801|Drosophila melanogaster CG2331-PA,
isoform A protein.
Length = 801
Score = 133 bits (322), Expect = 3e-31
Identities = 77/151 (50%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTV+LKGKRRKETVCIVLSDD CPDEKIRM SDVVS+ CP VKYGKRV
Sbjct: 52 DTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRV 111
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWRLTVRSIVTTPSWSAGACAPSSSKWSKQIHHHFA 614
ILPID+S EG+TGNLFE+YLKPY R I ++ A K +
Sbjct: 112 RILPIDESTEGVTGNLFEIYLKPYFLE-AYRPIHMGDNFIVRAAMRPIE--FKVVLTDPE 168
Query: 615 SWLLIP*YTVTV---NRLKRXXEEEALNAVG 698
+ ++ TV + +KR EEE+LNAVG
Sbjct: 169 PYCIVAPETVIFCDGDPIKREEEEESLNAVG 199
Score = 117 bits (282), Expect = 2e-26
Identities = 58/97 (59%), Positives = 67/97 (69%)
Frame = +2
Query: 494 LEAVLMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT*XR 673
L+ +EAYRPIH D F+VR MR +EFKVV TDP P+CIVAP+TVI CDG+PIK
Sbjct: 132 LKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEE 191
Query: 674 RGSTKCCRAMMTSGGCRKQLAPNLREMVELPLRHPSL 784
S GGCRKQLA ++EMVELPLRHPSL
Sbjct: 192 EESLNAV-GYDDIGGCRKQLA-QIKEMVELPLRHPSL 226
Score = 83.8 bits (198), Expect = 3e-16
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = +1
Query: 100 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
MAD+K +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRG
Sbjct: 1 MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRG 51
>AF202034-1|AAF17568.1| 799|Drosophila melanogaster endoplasmic
reticulum membranefusion protein protein.
Length = 799
Score = 133 bits (321), Expect = 3e-31
Identities = 62/87 (71%), Positives = 67/87 (77%)
Frame = +3
Query: 255 DTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRV 434
DTV+LKGKRRKETVCIVLSDD CPDEKIRM SDVVS+ CP VKYGKRV
Sbjct: 52 DTVILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRV 111
Query: 435 HILPIDDSVEGLTGNLFEVYLKPYLWR 515
ILPID+S EG+TGNLFE+YLKPY R
Sbjct: 112 RILPIDESTEGVTGNLFEIYLKPYFPR 138
Score = 104 bits (249), Expect = 2e-22
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2
Query: 527 IHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKT*XRRGSTKCCRAMM 706
IH D F+VR MR +EFKVV TDP P+CIVAP+TVI CDG+PIK S
Sbjct: 143 IHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAV-GYD 201
Query: 707 TSGGCRKQLAPNLREMVELPLRHPSL 784
GGCRKQLA ++EMVELPLRHPSL
Sbjct: 202 DIGGCRKQLA-QIKEMVELPLRHPSL 226
Score = 83.8 bits (198), Expect = 3e-16
Identities = 41/52 (78%), Positives = 49/52 (94%)
Frame = +1
Query: 100 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRG 255
MAD+K +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRG
Sbjct: 1 MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRG 51
>AE014298-1761|AAN09307.1| 618|Drosophila melanogaster CG32651-PA
protein.
Length = 618
Score = 31.1 bits (67), Expect = 2.0
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 283 ARKPFASCSQTIIALMRKFG*TVL*ETTFVCVFLMWYPSLRVLQ*NMENESTYCQLMIQL 462
A+ P +C +++ F T+ V + P L N+ NES C +IQL
Sbjct: 434 AKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNESVKCHAVIQL 493
Query: 463 RVLLAIYSKY 492
+ +L YSKY
Sbjct: 494 QNVLLEYSKY 503
>AY061606-1|AAL29154.1| 433|Drosophila melanogaster SD07148p
protein.
Length = 433
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHP 778
GGC++Q+ LRE+VE PL HP
Sbjct: 178 GGCKEQIE-KLREVVETPLLHP 198
>AF145307-1|AAF08388.1| 433|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p48B protein.
Length = 433
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHP 778
GGC++Q+ LRE+VE PL HP
Sbjct: 178 GGCKEQIE-KLREVVETPLLHP 198
>AE013599-469|AAF59219.1| 433|Drosophila melanogaster CG1341-PA
protein.
Length = 433
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2
Query: 713 GGCRKQLAPNLREMVELPLRHP 778
GGC++Q+ LRE+VE PL HP
Sbjct: 178 GGCKEQIE-KLREVVETPLLHP 198
>BT016123-1|AAV37008.1| 591|Drosophila melanogaster LD01328p
protein.
Length = 591
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 450 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 286
+LA+C LV L W H K E ++ G +F+HQ RL R + P
Sbjct: 13 RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64
>AY268068-1|AAQ56704.1| 591|Drosophila melanogaster
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
protein.
Length = 591
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 450 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 286
+LA+C LV L W H K E ++ G +F+HQ RL R + P
Sbjct: 13 RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64
>AF493067-1|AAM62412.1| 591|Drosophila melanogaster
UDP-N-acetylgalactosamine:
polypeptideN-acetylgalactosaminyltransferase 2 protein.
Length = 591
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 450 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 286
+LA+C LV L W H K E ++ G +F+HQ RL R + P
Sbjct: 13 RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64
>AE014298-2730|AAN09470.1| 591|Drosophila melanogaster CG6394-PB,
isoform B protein.
Length = 591
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 450 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 286
+LA+C LV L W H K E ++ G +F+HQ RL R + P
Sbjct: 13 RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64
>AE014298-2729|AAF48851.1| 591|Drosophila melanogaster CG6394-PA,
isoform A protein.
Length = 591
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 450 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 286
+LA+C LV L W H K E ++ G +F+HQ RL R + P
Sbjct: 13 RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,880,450
Number of Sequences: 53049
Number of extensions: 874242
Number of successful extensions: 2293
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -