Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0520
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    24   1.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.1  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   5.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   5.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   7.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.1  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -1

Query: 363 EKNPNLKLMIS 331
           EKNPNLK+M+S
Sbjct: 90  EKNPNLKVMLS 100


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 790 PTPKPKPWKTS 758
           PTPKP+P K S
Sbjct: 251 PTPKPRPTKVS 261


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 363 EKNPNLKLMIS 331
           EKNPN+K+++S
Sbjct: 89  EKNPNVKILLS 99


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 363 EKNPNLKLMIS 331
           EKNPN+K+++S
Sbjct: 89  EKNPNVKILLS 99


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 HFHICSVCRIKKKDNV 160
           H + C  CR+KK  NV
Sbjct: 88  HRNQCRACRLKKCQNV 103


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 HFHICSVCRIKKKDNV 160
           H + C  CR+KK  NV
Sbjct: 88  HRNQCRACRLKKCQNV 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,561
Number of Sequences: 336
Number of extensions: 3911
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)