Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0520
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 766 SKVLVLGWGH 795
           S V VLGWGH
Sbjct: 290 SDVTVLGWGH 299



 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 800 ILWPHPKTKTLEN 762
           +LW +P+TK L N
Sbjct: 353 VLWQNPRTKRLVN 365


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 544 SIRKXLTQWGCSXTXPLV 491
           SIR  + QW C    PL+
Sbjct: 479 SIRGAIQQWTCRQPEPLI 496


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 300 TSIDHIRTKKKPQISSLRG 244
           +S+D IRT+ K   SS+ G
Sbjct: 327 SSLDEIRTRYKDSSSSVEG 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,877
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)