Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0518
(381 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 51 4e-07
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 42 2e-04
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.004
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 36 0.015
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.019
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 34 0.034
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.059
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.059
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.059
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 33 0.078
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 33 0.10
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 32 0.18
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.18
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 31 0.24
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 31 0.24
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.24
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.24
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 31 0.32
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 30 0.73
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.97
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 1.3
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 1.3
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 1.3
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 2.2
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 28 2.2
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 2.2
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 27 5.2
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 27 6.8
SB_57589| Best HMM Match : DSBA (HMM E-Value=0.0042) 27 6.8
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013) 27 6.8
SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 26 9.0
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035) 26 9.0
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 26 9.0
SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07) 26 9.0
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 26 9.0
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +1
Query: 238 EDAMXTFVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
+D FVGGLS+ETT + L+++F YG + + + D TGR RGFA
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFA 73
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFG-AYGXIESIXVXTDPNTGRSRGF 378
FVGGL ET+D+ +R++FG AY ++ I T+ ++ R RGF
Sbjct: 106 FVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGF 147
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 47.2 bits (107), Expect = 5e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
FVGGL+ ETT++ LR++F AYG + + V D T +SRGF
Sbjct: 17 FVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGF 57
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
F+GGL+W TT++ L+D+F +G I + GRSRGF
Sbjct: 53 FIGGLNWNTTEEGLKDYFSQWGTIVDCVIM--KRDGRSRGF 91
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 241 DAMXTFVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
D V GL + TT+ ++++F +G I+ V DPNT RSRGF
Sbjct: 113 DVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGF 158
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
FVG L TT+K L ++F +G + + + P R GF
Sbjct: 202 FVGRLPESTTEKTLMEYFAQFGEVTDVYI---PKPFRHFGF 239
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 37.5 bits (83), Expect = 0.004
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXI-ESIXVXTDPNTGRSRGFA 381
F+G L E +K L D F A+G I ++ + D +TG S+GFA
Sbjct: 103 FIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFA 145
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
FVGG+ +E+ D LR F +G I V D T +S+G+
Sbjct: 13 FVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGY 53
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 35.1 bits (77), Expect = 0.019
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 259 VGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
V L++ TT + L+ F YG + I + D NT SRGFA
Sbjct: 20 VDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFA 60
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 34.3 bits (75), Expect = 0.034
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
F+G L ++ ++ LR+ F G +ES+ + D TG +GF
Sbjct: 59 FIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGF 99
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 33.5 bits (73), Expect = 0.059
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRG 375
FV LS +T + + +F YG + + + TD TG+S+G
Sbjct: 322 FVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKG 361
Score = 33.1 bits (72), Expect = 0.078
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 238 EDAMXTFVGGLSWETTDKXLRDHFGAYGXIESIXV-XTDPNTGRSRGF 378
+++ FVGGL+ T ++ L+D+F +G +ES+ + T R+ GF
Sbjct: 77 KNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGF 124
Score = 32.7 bits (71), Expect = 0.10
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRG 375
+VGGL T++ +R+HF +G IE++ + + G G
Sbjct: 160 YVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTG 199
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.5 bits (73), Expect = 0.059
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPN 357
+VGGL + T++ LRDHF +G + SI + N
Sbjct: 307 YVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQN 340
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 33.5 bits (73), Expect = 0.059
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIE 330
F+GGL++ TT++ L+++F YG +E
Sbjct: 205 FIGGLAFGTTEEDLKEYFSTYGMVE 229
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.1 bits (72), Expect = 0.078
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
+VGGL+ E +K L F +G I + + D T + RGF
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGF 48
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
++G L ++ + L+D F Y ++ + V +D T R RGFA
Sbjct: 233 YIGNLDFKVNEADLQDRFSRYDVVD-VQVISDRETQRPRGFA 273
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 277 ETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
+ + + LR HF +G ++ V DP T RSRGF
Sbjct: 118 QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGF 151
Score = 26.6 bits (56), Expect = 6.8
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXI 327
F+GGLS T+++ ++ +F +G +
Sbjct: 186 FIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
FVG + +E +++ L++ F G + S + D TG+ +G+
Sbjct: 28 FVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGY 68
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
+VG L + T+ ++ F +G ++S+ + D T RS+G+
Sbjct: 245 YVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGY 285
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
++G LS+ ++ L + F ++ + V TD TGR RGF
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCDVVD-VKVITDRETGRPRGF 47
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 31.5 bits (68), Expect = 0.24
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
FV G + ETT+ LR F YG ++ + D + G S+G+A
Sbjct: 11 FVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYA 51
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 31.5 bits (68), Expect = 0.24
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
FVG L +E T+ D YG IE + + TG S+G+
Sbjct: 116 FVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGY 156
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 31.5 bits (68), Expect = 0.24
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
+VG +++E ++ +R F +G I I + DP + +GFA
Sbjct: 105 YVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFA 146
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
++G LS+ ++ L + F ++ + V TD TGR RGF
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGF 124
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 31.1 bits (67), Expect = 0.32
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
++G L++ + + + F +G +E + + D +GRSRGF
Sbjct: 12 YIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGF 51
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
+VG L + T+ L F YG + + + D T SRG A
Sbjct: 13 YVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVA 54
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
+VG L+ + T+ L + F G + SI V D T RS G+A
Sbjct: 16 YVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYA 57
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 0.97
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 174
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN N TT+N N N N D D +DD
Sbjct: 173 NNINTTTTTTTNNNNNNNNNNNDDDDDDDTDDDDHNNNDD 212
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 85 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 174
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +1
Query: 247 MXTFVGGLSWETTDKXLRDHF-----GAYGXIESIXVXTDPNTGRSRGF 378
M FVGGL+ +TT++ +R +F G+ + S+ + P G+SR F
Sbjct: 8 MKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKF 55
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
+V L+ +++ F YG ++++ + TD SRGFA
Sbjct: 1160 YVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFA 1201
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.1 bits (62), Expect = 1.3
Identities = 19/85 (22%), Positives = 31/85 (36%)
Frame = +1
Query: 121 QLNGNAENGGGDSQDHNSAXXPGRDDDRCXXXXXXXXXXEDAMXTFVGGLSWETTDKXLR 300
Q NGN+ +N A P + FVG + ++ + L+
Sbjct: 37 QQNGNSSTNKAREISNNVAALPIDLVGEVSKDISKYKVVSNKCKVFVGNIGFKVRARELK 96
Query: 301 DHFGAYGXIESIXVXTDPNTGRSRG 375
D FG +G + + D RS+G
Sbjct: 97 DFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 259 VGGLSWETTDKXLRDHFGAYGXIESIXVXTD 351
V GLS TT++ LR F YG +E+I + D
Sbjct: 185 VFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 79 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
FV + E + + + F YG I+++ V D TG +G+A
Sbjct: 296 FVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYA 337
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 85 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
ND+ DI D+ NGN + G D+ D ++ DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDD 57
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 2.2
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +1
Query: 85 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 174
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGFA 381
F+GGL + +++ ++G + + + D TG S+G+A
Sbjct: 676 FIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYA 717
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N D +DN + N++N ++ D+N+ R D
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGAD 652
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDDRCXXXXXXXXXXEDAMXTFV 261
NN+N + DN + N++N ++ D+NS + +R + ++
Sbjct: 609 NNNNNNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEG---WI 665
Query: 262 GGLSWE 279
GL+WE
Sbjct: 666 RGLNWE 671
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NNDN + + +N N N N ++ D+NS + D
Sbjct: 593 NNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSD 632
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N +I +N N N N ++ ++N+ DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 2.2
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQD 165
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 238 EDAMXTFVGGLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRGF 378
++ M F+G LS++ ++ L F G + V T GRSRGF
Sbjct: 177 KEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVIT--QEGRSRGF 221
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N + +N N N N ++ D NS DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N + +N N N N ++ ++N+ DDD
Sbjct: 14 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDD 53
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N + +N N N N D+ D + DDD
Sbjct: 22 NNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDDDDDD 61
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 171
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 265 GLSWETTDKXLRDHFGAYGXIESIXVXTDPNTGRSRG 375
GL+ K L++ YG I++I V DP T +RG
Sbjct: 146 GLNDNVDKKFLQEICQKYGTIQTIKVYYDPQTKNTRG 182
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 171
NNDN+ + DN N + NG DS D+N
Sbjct: 192 NNDNYDNNDNNDNNDNNDNYDNNGNNDSNDNN 223
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLN--GNAENGGGDSQDHN 171
NNDN + DN N N NG D+ D+N
Sbjct: 96 NNDNNGNNDNNDNNDNNDNNDNNGNNDNNDNN 127
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N +I +N N N N ++ ++N+ DDD
Sbjct: 64 NNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDDDDD 103
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
+N+N +DI N EN GG+S + N DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NNDN ++ +N + N +N D D N+ DDD
Sbjct: 119 NNDNNNKNNNNNNDDDDNNKNDNDDDYDDNNNNNDDYDDD 158
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 256 FVGGLSWETTDKXLRDHFGAYGXIESI 336
FVG L K L+ +F YG +ES+
Sbjct: 24 FVGNLPLTLKKKALKKYFSKYGEVESV 50
>SB_57589| Best HMM Match : DSBA (HMM E-Value=0.0042)
Length = 300
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 103 DITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
D +DN NG E+GGG D N +DD+
Sbjct: 165 DGNSDNY-NGEGEDGGGGGGDRNGDYDNDKDDN 196
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN+N + +N N N N D D + DDD
Sbjct: 87 NNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDNDDD 126
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNG-NAENGGGDSQDHNSAXXPGRDDD 201
NNDN+ + T DN N N +N + D+N ++D
Sbjct: 195 NNDNYDNNGTNDNNDNNYNYDNNDNNDNDNNDNNDKNDNND 235
>SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013)
Length = 396
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
++DN D + D++ + N +N GD D + G DDD
Sbjct: 151 DDDNDDDDSSDDDRSDDNGDNDEGDDNDDDGTF--GDDDD 188
>SB_58045| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1752
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 354 WICLYXNTLYXTVCSKMITEXLICGLPAQPT 262
W+CL+ + TVCS+ + + G+ A PT
Sbjct: 163 WMCLFPSAR-RTVCSRKSSAVTLMGIAAGPT 192
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 88 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAXXPGRDDD 201
D + D D+ + + +N G GD D+ A G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDD 198
+NDN D N N+ +G +S D N + G D+
Sbjct: 19 DNDNSGDDNDNSGDDNDNSGDGNDNSGDGNDSNGDGNDN 57
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 NNDNFAQDITTD-NQLNGNAENGGGDSQDHNSAXXPGRDDD 201
+N D + D N NG+ + GD D++ RDDD
Sbjct: 35 DNSGDGNDNSGDGNDSNGDGNDNSGDGNDNSGDGNCNRDDD 75
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDH-NSAXXPGRDDD 201
+ND ++I DN+ N N +N DS ++ N +DD
Sbjct: 89 DNDTNDENINDDNEKNTNDKNNNDDSNENTNDDNDKNTNDD 129
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 112 TDNQLNGNAENGGGDSQDHN 171
T+N NG++++GGG + ++N
Sbjct: 17 TNNNTNGSSDSGGGGADENN 36
>SB_30249| Best HMM Match : Extensin_2 (HMM E-Value=0.035)
Length = 624
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDDRC 207
NND D N G+ ++G GD D+N+ G DD C
Sbjct: 343 NNDGQDDDGDDANGYGGDVDDGCGDGGDYNN----GGCDDGC 380
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 26.2 bits (55), Expect = 9.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSA 177
N+D+ + DN + +A +GGGD+ D++ +
Sbjct: 802 NDDDDDDNGDADNGRDNDAHDGGGDNSDYDGS 833
>SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 85 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
+D+ D D+ + +GGGD D + G DDD
Sbjct: 104 DDDGDDDDDDDDDDDDGGGDGGGDGDDDDDGNGDGGDDD 142
>SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 423
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 82 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
NN N ++ DN + +A+N D D+N+ G DD
Sbjct: 14 NNGNDDENNYNDNHNDKDADNKNNDDGDNNNNDKCGYKDD 53
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 115 DNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
DN + + ++GGGD D N G DDD
Sbjct: 92 DNDDSNDVDDGGGDGDDDNDG--DGVDDD 118
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 79 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
+N+DN D +T N N N EN D+ + N++ + D
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSD 141
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 79 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
+N+DN D +T N N N EN D+ + N++ + D
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSD 327
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,632,823
Number of Sequences: 59808
Number of extensions: 175644
Number of successful extensions: 1724
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 644574580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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