Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0518
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   1.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.6  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   4.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   4.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.5  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 100 QDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDDR 204
           Q+    N  N NA N   D+Q+ N      ++D+R
Sbjct: 430 QNADNQNADNQNANNQNADNQNANKQNGNRQNDNR 464



 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 115 DNQLNGNAENGGGDSQDHNS 174
           DN+ NGN +N   ++Q+ N+
Sbjct: 512 DNKRNGNRQNDNQNNQNDNN 531



 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 115 DNQLNGNAENGGGDSQDHNSAXXPGRDDDR 204
           DN+ NGN +N  G+ Q+ N      ++D++
Sbjct: 487 DNKQNGNRQN--GNKQNDNKQNGNRQNDNK 514



 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 118 NQLNGNAENGGGDSQDHNSAXXPGRDDDR 204
           N+ N N  NG   + + N+     R+D++
Sbjct: 508 NRQNDNKRNGNRQNDNQNNQNDNNRNDNQ 536



 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 115 DNQLNGNAENGGGDSQDHNSA 177
           DNQ N N +N   D+Q H+S+
Sbjct: 522 DNQNNQN-DNNRNDNQVHHSS 541


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +1

Query: 82  NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAXXPGRDDD 201
           N +  A +   +N  N N  NG  D+ + N A     + D
Sbjct: 232 NANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNNGD 271


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 265 GLSWETTDKXLRDHF 309
           G+S ET  K + DHF
Sbjct: 155 GMSKETQQKLIDDHF 169


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 265 GLSWETTDKXLRDHF 309
           G+S ET  K + DHF
Sbjct: 171 GMSKETQQKLIDDHF 185


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 106 ITTDNQLNGNAENGGGDSQDHNSA 177
           +T+ + +N N+ NG  +S   +S+
Sbjct: 532 LTSSSNVNNNSGNGNTNSSARDSS 555


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 85  NDNFAQDITTDNQLNGNAENGGGDSQ 162
           ND    D   D++ N   E+G G S+
Sbjct: 272 NDGEGADDRDDDEENEEEEDGRGQSE 297


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,933
Number of Sequences: 438
Number of extensions: 1490
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)