BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0517 (829 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 171 9e-45 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 163 2e-42 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 153 1e-39 EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 126 2e-31 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.023 AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.5 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.4 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 171 bits (415), Expect = 9e-45 Identities = 104/189 (55%), Positives = 113/189 (59%) Frame = +1 Query: 253 GKGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432 GKGSFKYAWVLDKLKAERE ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 109 Query: 433 XXAVLIVAAGTGEFEAGISKNGXTRGMPCXXXXXXXXXXXXE*TKWIPLXHHTVSPDFEG 612 AVLIVAAGTGEFEAGISKNG TR K FE Sbjct: 110 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEE 169 Query: 613 IQGRGSILIXPRRFGYKPSCCRFSCPFLGWARRQHVGXFXQKCLCSKGWAVGA*SKXXLD 792 I+ S I ++ GY P+ F P GW ++ K KGW V + ++ Sbjct: 170 IKKEVSSYI--KKIGYNPAAVAF-VPISGW-HGDNMLEVSSKMPWFKGWTVER-KEGKVE 224 Query: 793 GKIXXIEAL 819 GK IEAL Sbjct: 225 GK-CLIEAL 232 Score = 73.3 bits (172), Expect = 2e-15 Identities = 36/51 (70%), Positives = 36/51 (70%) Frame = +2 Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259 MGKEK HINIVVIGHVDSGKSTTTG LIYKCGG AQEM K Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 163 bits (395), Expect = 2e-42 Identities = 78/85 (91%), Positives = 79/85 (92%) Frame = +1 Query: 253 GKGSFKYAWVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 432 GKGSFKYAWVLDKLKAERE ITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQA Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQA 109 Query: 433 XXAVLIVAAGTGEFEAGISKNGXTR 507 AVLIVAAG GEFEAGISKNG TR Sbjct: 110 DCAVLIVAAGIGEFEAGISKNGQTR 134 Score = 73.3 bits (172), Expect = 2e-15 Identities = 36/51 (70%), Positives = 36/51 (70%) Frame = +2 Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGXLIYKCGGXXXXXXXXXXXXAQEMVK 259 MGKEK HINIVVIGHVDSGKSTTTG LIYKCGG AQEM K Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 51 Score = 67.3 bits (157), Expect = 2e-13 Identities = 39/63 (61%), Positives = 43/63 (68%) Frame = +3 Query: 510 HALLAFTLGVKQLIVGVNKMDSTEXPYSEPRF*GNSRKGKYPHTSKKIWLQTQLLSLFVP 689 HALLAFTLGVKQLIVGVNKMD T+ PYSE RF K + KKI T ++ FVP Sbjct: 136 HALLAFTLGVKQLIVGVNKMDMTDPPYSEARF--EEIKKEVSSYIKKIGYNTASVA-FVP 192 Query: 690 ISG 698 ISG Sbjct: 193 ISG 195 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 153 bits (372), Expect = 1e-39 Identities = 96/181 (53%), Positives = 105/181 (58%) Frame = +1 Query: 277 WVLDKLKAEREVXITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVA 456 WVLDKLKAERE ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA AVLIVA Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60 Query: 457 AGTGEFEAGISKNGXTRGMPCXXXXXXXXXXXXE*TKWIPLXHHTVSPDFEGIQGRGSIL 636 AGTGEFEAGISKNG TR K FE I+ S Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120 Query: 637 IXPRRFGYKPSCCRFSCPFLGWARRQHVGXFXQKCLCSKGWAVGA*SKXXLDGKIXXIEA 816 I ++ GY P+ F P GW ++ K KGW V + ++GK IEA Sbjct: 121 I--KKIGYNPAAVAF-VPISGW-HGDNMLEVSSKMPWFKGWTVER-KEGKVEGK-CLIEA 174 Query: 817 L 819 L Sbjct: 175 L 175 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 126 bits (305), Expect = 2e-31 Identities = 82/165 (49%), Positives = 91/165 (55%) Frame = +1 Query: 325 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAGTGEFEAGISKNGXT 504 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA AVLIVAAGTGEFEAGISKNG T Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60 Query: 505 RGMPCXXXXXXXXXXXXE*TKWIPLXHHTVSPDFEGIQGRGSILIXPRRFGYKPSCCRFS 684 R K FE I+ S I ++ GY P+ F Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYI--KKIGYNPAAVAF- 117 Query: 685 CPFLGWARRQHVGXFXQKCLCSKGWAVGA*SKXXLDGKIXXIEAL 819 P GW ++ K KGW V + ++GK IEAL Sbjct: 118 VPISGW-HGDNMLEVSSKMPWFKGWTVER-KEGKVEGK-CLIEAL 159 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 30.3 bits (65), Expect = 0.023 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +1 Query: 364 VTIIDAPGHRDFIKNMITGTSQAXXAVLIVAAGTG 468 VT +D PGH FI G VL+VAA G Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229 Score = 25.4 bits (53), Expect = 0.65 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 119 KTHINIVVIGHVDSGKST 172 K H + ++GHVD GK+T Sbjct: 143 KRHPIVTIMGHVDHGKTT 160 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 24.2 bits (50), Expect = 1.5 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +2 Query: 128 INIVVIGHVDSGKST 172 INI IGHV GKST Sbjct: 43 INIGTIGHVAHGKST 57 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 23.0 bits (47), Expect = 3.4 Identities = 8/26 (30%), Positives = 14/26 (53%) Frame = -2 Query: 627 SPSLNSLKIWAHCMVXQWNPFCLLLR 550 SPS +++ W + W P L++R Sbjct: 340 SPSTHNMSPWVRQVFLNWMPRLLMMR 365 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 217,307 Number of Sequences: 438 Number of extensions: 3959 Number of successful extensions: 22 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 26460186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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